Gene detail information of Glyur001488s00041211 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN11296.1 | 1.47E-08 | DNA replication complex GINS protein SLD5 [Glycine soja] |
| trEMBL | tr|C6TH08|C6TH08_SOYBN | 5.00E-09 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU21110.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01488 | 45627 | 46683 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.237 |
| SRR1783600 | control | 3.154 |
| SRR1783602 | moderate drought stress | 34.003 |
| SRR1811619 | moderate drought stress | 35.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.240 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.543 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.067 |
| SRR2868004 | Drought Stress (root) | 11.922 |
| SRR2967015 | Control (root) | 8.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.323 |
| SRR9715740 | Leaf | 0.975 |
| SRR9715741 | Leaf | 6.201 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.906 |
| SRR9715743 | Root | 1.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.051 |
| SRR8749028 | MeJA induced 9h | 4.147 |
| SRR8749029 | MeJA induced 9h | 0.117 |
| SRR8749030 | Uninduced | 2.020 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.501 |
| SRR8400027 | Control - Root | 12.018 |