Gene detail information of Glyur001486s00034308 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G74450.1 | 8.00E-105 | Protein of unknown function (DUF793) |
| NR | KHN00760.1 | 0 | hypothetical protein glysoja_000428 [Glycine soja] |
| Swissprot | tr|Q10QE9|U496A_ORYSJ | 1.00E-06 | UPF0496 protein 1 |
| trEMBL | tr|I1JDE3|I1JDE3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G09000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01486 | 18983 | 20173 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001486s00034308.1 | PF05633.6 | DUF793 | 9 | 393 | 1.10E-151 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.123 |
| SRR1783600 | control | 0.123 |
| SRR1783602 | moderate drought stress | 0.096 |
| SRR1811619 | moderate drought stress | 0.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.371 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.169 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.178 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.059 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.937 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.943 |
| SRR2868004 | Drought Stress (root) | 3.477 |
| SRR2967015 | Control (root) | 39.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 42.321 |
| SRR9715740 | Leaf | 52.671 |
| SRR9715741 | Leaf | 34.729 |
| SRR9715739 | Root | 128.275 |
| SRR9715742 | Root | 175.653 |
| SRR9715743 | Root | 188.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.592 |
| SRR8749028 | MeJA induced 9h | 2.454 |
| SRR8749029 | MeJA induced 9h | 1.465 |
| SRR8749030 | Uninduced | 6.833 |
| SRR8749031 | Uninduced | 2.128 |
| SRR8749032 | Uninduced | 0.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.807 |
| SRR8400027 | Control - Root | 11.925 |