Gene detail information of Glyur001485s00035540 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G51870.1 | 1.00E-141 | Mitochondrial substrate carrier family protein |
| NR | XP_004506741.1 | 0 | PREDICTED: thylakoid ADP,ATP carrier protein, chloroplastic-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|O65023|EAAC_ARATH | 0 | Probable envelope ADP,ATP carrier protein, chloroplastic (Precursor) |
| trEMBL | tr|I1JLF9|I1JLF9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G08120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01485 | 14079 | 18588 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001485s00035540.1 | PF00153.22 | Mito_carr | 90 | 181 | 3.00E-24 |
| Glyur001485s00035540.1 | PF00153.22 | Mito_carr | 184 | 271 | 8.60E-20 |
| Glyur001485s00035540.1 | PF00153.22 | Mito_carr | 279 | 360 | 3.10E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.785 |
| SRR1783600 | control | 5.585 |
| SRR1783602 | moderate drought stress | 6.431 |
| SRR1811619 | moderate drought stress | 6.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.941 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.930 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.707 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.357 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.133 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.285 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.166 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.170 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.942 |
| SRR2868004 | Drought Stress (root) | 10.934 |
| SRR2967015 | Control (root) | 9.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.605 |
| SRR9715740 | Leaf | 14.227 |
| SRR9715741 | Leaf | 9.503 |
| SRR9715739 | Root | 2.434 |
| SRR9715742 | Root | 4.297 |
| SRR9715743 | Root | 3.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.014 |
| SRR8749028 | MeJA induced 9h | 9.351 |
| SRR8749029 | MeJA induced 9h | 22.990 |
| SRR8749030 | Uninduced | 22.868 |
| SRR8749031 | Uninduced | 20.402 |
| SRR8749032 | Uninduced | 24.009 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.996 |
| SRR8400027 | Control - Root | 7.574 |