Gene detail

Gene detail information of Glyur001481s00033622.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G14350.3	0	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NR	XP_003535228.1	0	PREDICTED: serine/threonine-protein kinase 38-like isoform X1 [Glycine max]
COG	YP_007203500.1	1.00E-24	serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
Swissprot	tr\|F4HYG2\|IRE3_ARATH	1.00E-80	Probable serine/threonine protein kinase IRE3 {ECO:0000305}
trEMBL	tr\|K7LGQ9\|K7LGQ9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA10G00830.2}

Sequence

Transcript Sequence

>Glyur001481s00033622.1
ACAAAACCAAAACAAAACGCAAAAAGCAAAGCCAGCGAATGAATGAAACTTGGGTATCACCTTCACATCACAGTCACAATCATCAACAACACAAACCAAACTGCTTCTCTACTCTCCTCCACCGTTAATCTCGCCGTGTTCCCTTCTCTATCTCTTTTACCCTTCACCACACTCCTTCTCCACTCCCAGATTCATCTCAATTCAAGAAATTGCAATTAGTNCACCTTGGATTCTTCTGGTGAACAATGGTGCGTTGATTTTTGTGTCTGGCATAATGAGATCCGTGTTTGGCAAAACTTCTAGTCTTTAGTGTTTGGTAAAGTAGGATATTTAACACAAGAACCTAAGAGGCGAACGAATAGAATGGAAACTACAAGGCGCTGGTTTAGTAAGTTCAAGGCAAATGATAAAATGAAGCCTTCAAAAAACAAGGAAGCTGCAGGCGTGACAAAAGACGGGTCAAAACCCCCAACAAATGAAGAAGCGCCTTCAGATGTAACCAAACAAAAGGTTGAAGCTGCAAAGCATTACATAGAAAATCATTACAAGAAGCAGATGCAGAGCCTACAGGAGAGGAAGGAAAGACGTACTATTCTAGAAAAAAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAATTTGATTAAGTATTTCGAGAAAAAGGAGACAGAATACATGCGCCTTCAGAGACATAAGATGGGGGCTGATGACTTTGAGCCCCTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGAATCTGCCGGGAGAAGGCAACCGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTTGAACATGTCAAAGCTGAGAGGAACCTACTTGCAGAAGTCGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTGTTTATATCTGATAATGGAGTATCTACCTGGTGGAGATATGATGACCTTGCTGATGCGGAAGGATATACTGACAGAAGATGAGGCTAGGTTCTATGTTGGGGAGACTGTCCTAGCCATAGAGTCGATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTTGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCACTAGACTGCAGTAATCTTCAGGAAAAAGACTTCACTGTTGAAATTAACAGAAGTGGAGCCCTTCAAAGTGATGGACGTCCTGCACCTCCTAAACGAACACAACAGGAGCAACTGCAGCATTGGCAGAAAAATCGGCGAATGCTGGCCTATTCTACGGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTGCTGAAGAAAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGCNATAATGTATGAAATGCTTGTGGGGTATCCACCATTTTATTCAGATGAACCAATAGCCACTTGTAGAAAGATAGTAAACTGGAGAACTCATTTGAAGTTTCCAGAAGAAGCTAAACTATCAGCAGAGGCAAAGGATCTTATTTGTAGACTCCTATGTAATGTGGAGCAGAGGCTTGGAACCAAAGGAGCTGATGAAATAAAGGCTCACCCATGGTTCAACGGTATTGAATGGGATAAATTGTACCAAATGAAAGCTGCTTTTATACCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAATTTGAAGAGGCGGACAAGCAAACTGAATCTTCGTCAAAGGCAGGGCCGTGGAGAAAGATGCTACCATCTAAAGATATTAACTTTGTTGGCTACACATACAAGAATGTTGAAATCGTGAATGATCATGAAATACCTGGAATTGCTGAATTGAAGAAGAAGAGCACAAAACCTAAAAGGCCATCTATTAAGGCTCTATTTGATGATGAGACAGCTATGGCTGCAAATCAACCTGTTAGAGGGAGCTTCTTAAACCTCTTACCTACTCAAATGGAAGTTCCTGAGAAAAGTGAATCACAGTGATCTTAACTAATATCTTACNGTATTTCTAGAAGGCCATGGAGATATATGACCAAATGTTGATGACTAATTGTTTTTACTCTTTACTACATTCTTTGTTAGTTTGGTGTTGATAGATTTGGGAGTCAAGCCCCTCAAACTTNTGGTTTTGGATAGCTGGTTTTTTGGCTGACTTGGGATATTTATTGTGTAGAGAAATCGTTTAAGGTGTACATTCTTTAGTTCACCTTTTACCAANGCTGCAATATGTTAAATAGTCATTCCTTGTAACTAAGTTACTGCTTAAGTGCTTATAAAAATGTGCAATTCACATATTTCTATACTATTTTTTTCCTTTTCCTTTTCCTTTTTGGTTTTTACCCATAGTATC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01481	44007	51076	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.6

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001481s00033622.1	PF00069.20	Pkinase	122	418	6.40E-64
Glyur001481s00033622.1	PF00433.19	Pkinase_C	437	483	0.00023

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	26.846
SRR1783600	control	26.759
SRR1783602	moderate drought stress	19.835
SRR1811619	moderate drought stress	19.727

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	34.946
DRR006520	Root Summer glycyrrhizin high producing strain	34.703
DRR006521	Root Winter glycyrrhizin high producing strain	5.160
DRR006522	Root Winter glycyrrhizin high producing strain	5.087
DRR006523	Root Summer glycyrrhizin low producing strain	61.017
DRR006524	Root Summer glycyrrhizin low producing strain	61.099
DRR006525	Leaf Summer glycyrrhizin high producing strain	18.062
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.787

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	55.476
SRR2868004	Drought Stress (root)	59.250
SRR2967015	Control (root)	53.726

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	51.244
SRR9715740	Leaf	47.813
SRR9715741	Leaf	61.492
SRR9715739	Root	9.024
SRR9715742	Root	39.518
SRR9715743	Root	31.302

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	46.994
SRR8749028	MeJA induced 9h	54.546
SRR8749029	MeJA induced 9h	51.191
SRR8749030	Uninduced	31.807
SRR8749031	Uninduced	28.641
SRR8749032	Uninduced	18.170

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	53.380
SRR8400027	Control - Root	66.683