Gene detail information of Glyur001478s00040950 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39705.1 | 6.00E-14 | ROTUNDIFOLIA like 8 |
| NR | KDP44933.1 | 1.59E-34 | hypothetical protein JCGZ_01433 [Jatropha curcas] |
| trEMBL | tr|A0A067LCG0|A0A067LCG0_JATCU | 6.00E-35 | Uncharacterized protein {ECO:0000313|EMBL:KDP44933.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01478 | 67397 | 67717 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001478s00040950.1 | PF08137.7 | DVL | 81 | 99 | 1.50E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.877 |
| SRR1783600 | control | 6.207 |
| SRR1783602 | moderate drought stress | 10.370 |
| SRR1811619 | moderate drought stress | 8.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.452 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.836 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.703 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.667 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.277 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.662 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.853 |
| SRR2868004 | Drought Stress (root) | 7.970 |
| SRR2967015 | Control (root) | 14.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 1.530 |
| SRR9715742 | Root | 2.221 |
| SRR9715743 | Root | 1.257 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.294 |
| SRR8749028 | MeJA induced 9h | 1.141 |
| SRR8749029 | MeJA induced 9h | 0.598 |
| SRR8749030 | Uninduced | 0.145 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.787 |
| SRR8400027 | Control - Root | 14.853 |