Gene detail information of Glyur001473s00033914 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36840.1 | 4.00E-152 | ACT-like superfamily protein |
| NR | XP_004515911.1 | 0 | PREDICTED: uncharacterized protein LOC101492421 [Cicer arietinum] |
| Swissprot | tr|Q9SJM1|ACR10_ARATH | 0 | ACT domain-containing protein ACR10 {ECO:0000305} |
| trEMBL | tr|A0A072VVP3|A0A072VVP3_MEDTR | 0 | Four ACT domain ACT domain protein which protein {ECO:0000313|EMBL:KEH42165.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01473 | 20100 | 24524 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001473s00033914.1 | PF01842.20 | ACT | 112 | 165 | 7.20E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.381 |
| SRR1783600 | control | 20.351 |
| SRR1783602 | moderate drought stress | 19.750 |
| SRR1811619 | moderate drought stress | 19.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.112 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 23.057 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.131 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.725 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 28.287 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.937 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.269 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.151 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.837 |
| SRR2868004 | Drought Stress (root) | 47.847 |
| SRR2967015 | Control (root) | 68.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.469 |
| SRR9715740 | Leaf | 6.412 |
| SRR9715741 | Leaf | 5.824 |
| SRR9715739 | Root | 15.033 |
| SRR9715742 | Root | 24.680 |
| SRR9715743 | Root | 25.210 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.889 |
| SRR8749028 | MeJA induced 9h | 4.956 |
| SRR8749029 | MeJA induced 9h | 4.952 |
| SRR8749030 | Uninduced | 1.994 |
| SRR8749031 | Uninduced | 1.901 |
| SRR8749032 | Uninduced | 2.375 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 61.693 |
| SRR8400027 | Control - Root | 62.642 |