Gene detail information of Glyur001470s00040463 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21390.1 | 8.00E-11 | embryo defective 2170 |
| NR | XP_004502559.1 | 1.70E-32 | PREDICTED: uncharacterized protein LOC101509525 [Cicer arietinum] |
| trEMBL | tr|I1KAG8|I1KAG8_SOYBN | 6.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G12580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01470 | 55180 | 57742 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.532 |
| SRR1783600 | control | 25.135 |
| SRR1783602 | moderate drought stress | 31.723 |
| SRR1811619 | moderate drought stress | 30.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.132 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.041 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.251 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.688 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.624 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.142 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.101 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.904 |
| SRR2868004 | Drought Stress (root) | 72.263 |
| SRR2967015 | Control (root) | 54.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.334 |
| SRR9715740 | Leaf | 25.816 |
| SRR9715741 | Leaf | 37.721 |
| SRR9715739 | Root | 7.073 |
| SRR9715742 | Root | 11.831 |
| SRR9715743 | Root | 13.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 40.567 |
| SRR8749028 | MeJA induced 9h | 174.953 |
| SRR8749029 | MeJA induced 9h | 284.811 |
| SRR8749030 | Uninduced | 48.793 |
| SRR8749031 | Uninduced | 178.186 |
| SRR8749032 | Uninduced | 101.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 63.781 |
| SRR8400027 | Control - Root | 45.093 |