Gene detail information of Glyur001468s00039409 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003555480.2 | 1.96E-09 | PREDICTED: shugoshin-1-like [Glycine max] |
| trEMBL | tr|K7N4H6|K7N4H6_SOYBN | 1.00E-09 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G33560.3} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01468 | 68280 | 70041 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.743 |
| SRR1783600 | control | 0.486 |
| SRR1783602 | moderate drought stress | 1.777 |
| SRR1811619 | moderate drought stress | 1.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.578 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.032 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.425 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.293 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.808 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.473 |
| SRR2868004 | Drought Stress (root) | 0.496 |
| SRR2967015 | Control (root) | 0.808 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.566 |
| SRR9715740 | Leaf | 0.666 |
| SRR9715741 | Leaf | 0.304 |
| SRR9715739 | Root | 0.538 |
| SRR9715742 | Root | 0.565 |
| SRR9715743 | Root | 0.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.004 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.627 |
| SRR8400027 | Control - Root | 2.869 |