Gene detail information of Glyur001467s00033959 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38760.1 | 7.00E-05 | Late embryogenesis abundant protein (LEA) family protein |
| NR | XP_004491768.1 | 7.71E-25 | PREDICTED: late embryogenesis abundant protein 1-like [Cicer arietinum] |
| trEMBL | tr|A0A072TWD3|A0A072TWD3_MEDTR | 9.00E-25 | Late embryogenesis abundant protein (LEA) family protein {ECO:0000313|EMBL:KEH21804.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01467 | 20257 | 21660 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.133 |
| SRR1783600 | control | 0.133 |
| SRR1783602 | moderate drought stress | 3.450 |
| SRR1811619 | moderate drought stress | 3.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.574 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.490 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 649.227 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 618.341 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.673 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.221 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 464.249 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 450.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.192 |
| SRR2868004 | Drought Stress (root) | 0.045 |
| SRR2967015 | Control (root) | 0.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 62.843 |
| SRR9715740 | Leaf | 142.723 |
| SRR9715741 | Leaf | 28.989 |
| SRR9715739 | Root | 0.086 |
| SRR9715742 | Root | 0.331 |
| SRR9715743 | Root | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.149 |
| SRR8400027 | Control - Root | 0.047 |