Gene detail information of Glyur001466s00031923 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37860.3 | 2.00E-138 | Protein of unknown function (DUF3411) |
| NR | XP_004515944.1 | 0 | PREDICTED: uncharacterized protein LOC101503183 [Cicer arietinum] |
| trEMBL | tr|I1KK44|I1KK44_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G16640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01466 | 42963 | 47532 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001466s00031923.1 | PF11891.3 | DUF3411 | 216 | 395 | 7.30E-71 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 59.373 |
| SRR1783600 | control | 59.437 |
| SRR1783602 | moderate drought stress | 50.186 |
| SRR1811619 | moderate drought stress | 50.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 64.921 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 64.543 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.634 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 40.971 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 41.078 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.023 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 133.756 |
| SRR2868004 | Drought Stress (root) | 69.059 |
| SRR2967015 | Control (root) | 73.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.353 |
| SRR9715740 | Leaf | 17.455 |
| SRR9715741 | Leaf | 17.772 |
| SRR9715739 | Root | 55.841 |
| SRR9715742 | Root | 111.619 |
| SRR9715743 | Root | 103.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.528 |
| SRR8749028 | MeJA induced 9h | 22.965 |
| SRR8749029 | MeJA induced 9h | 26.291 |
| SRR8749030 | Uninduced | 15.903 |
| SRR8749031 | Uninduced | 5.726 |
| SRR8749032 | Uninduced | 13.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 110.418 |
| SRR8400027 | Control - Root | 105.423 |