Gene detail information of Glyur001464s00031024 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45870.1 | 3.00E-05 | PYR1-like 12 |
| NR | XP_003527268.1 | 1.30E-82 | PREDICTED: S-norcoclaurine synthase-like [Glycine max] |
| Swissprot | tr|G7J032|PHBP_MEDTR | 6.00E-83 | Phytohormone-binding protein |
| trEMBL | tr|I1KE09|I1KE09_SOYBN | 5.00E-83 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G38540.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01464 | 6394 | 7634 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001464s00031024.1 | PF00407.14 | Bet_v_1 | 2 | 153 | 5.10E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.128 |
| SRR1783600 | control | 19.147 |
| SRR1783602 | moderate drought stress | 14.701 |
| SRR1811619 | moderate drought stress | 14.401 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.724 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.408 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.881 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.553 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.543 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 25.822 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 68.284 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 68.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 139.999 |
| SRR2868004 | Drought Stress (root) | 99.714 |
| SRR2967015 | Control (root) | 82.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 38.657 |
| SRR9715740 | Leaf | 82.253 |
| SRR9715741 | Leaf | 68.691 |
| SRR9715739 | Root | 2.575 |
| SRR9715742 | Root | 31.677 |
| SRR9715743 | Root | 26.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 37.257 |
| SRR8749028 | MeJA induced 9h | 33.572 |
| SRR8749029 | MeJA induced 9h | 20.929 |
| SRR8749030 | Uninduced | 2.968 |
| SRR8749031 | Uninduced | 2.252 |
| SRR8749032 | Uninduced | 1.120 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.487 |
| SRR8400027 | Control - Root | 35.722 |