Gene detail information of Glyur001463s00032094 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39830.1 | 4.00E-47 | Cupredoxin superfamily protein |
| NR | XP_003532840.1 | 1.45E-72 | PREDICTED: L-ascorbate oxidase-like [Glycine max] |
| Swissprot | tr|Q40588|ASO_TOBAC | 1.00E-38 | L-ascorbate oxidase (Precursor) |
| trEMBL | tr|I1KT59|I1KT59_SOYBN | 5.00E-73 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G14730.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01463 | 63136 | 66046 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001463s00032094.1 | PF07731.9 | Cu-oxidase_2 | 128 | 181 | 1.80E-16 |
| Glyur001463s00032094.1 | PF00394.17 | Cu-oxidase | 221 | 257 | 1.80E-09 |
| Glyur001463s00032094.1 | PF07731.9 | Cu-oxidase_2 | 328 | 384 | 5.00E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.223 |
| SRR1783600 | control | 0.198 |
| SRR1783602 | moderate drought stress | 0.043 |
| SRR1811619 | moderate drought stress | 0.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.614 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.469 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.310 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.573 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.480 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.314 |
| SRR2868004 | Drought Stress (root) | 5.039 |
| SRR2967015 | Control (root) | 5.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.074 |
| SRR9715740 | Leaf | 31.426 |
| SRR9715741 | Leaf | 48.289 |
| SRR9715739 | Root | 1.765 |
| SRR9715742 | Root | 10.128 |
| SRR9715743 | Root | 7.030 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.097 |
| SRR8749028 | MeJA induced 9h | 1.865 |
| SRR8749029 | MeJA induced 9h | 1.154 |
| SRR8749030 | Uninduced | 19.849 |
| SRR8749031 | Uninduced | 2.336 |
| SRR8749032 | Uninduced | 1.912 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.790 |
| SRR8400027 | Control - Root | 2.141 |