Gene detail

Gene detail information of Glyur001463s00032086

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G22240.1	0	myo-inositol-1-phosphate synthase 2
NR	ABC55421.1	0	myo-inositol-1-phosphate synthase [Glycine max]
COG	YP_005007067.1	3.00E-71	Inositol-3-phosphate synthase [Niastella koreensis GR20-10]
Swissprot	tr\|Q9FYV1\|INO1_SESIN	0	Inositol-3-phosphate synthase
trEMBL	tr\|Q2MJR4\|Q2MJR4_SOYBN	0	Myo-inositol-1-phosphate synthase {ECO:0000313\|EMBL:ABC55421.1}

Sequence

Transcript Sequence

>Glyur001463s00032086.1
ACACAACCACCCTTCTCACTCAGTAACTGCTTTCTTATCTTTTCCTTTCCTTCTAAGGTTGTTTTTTCCGTTTCTCTTGACTGCTTCAAAAATGTTCATCGAGAGTTTCAAGGTTGAGAGTCCCAACGTGAAGTACACAGAGACTGAGATTCAGTCCGTGTATAACTATGAAACCACTGAACTCGTTCACGAGATCAGGAATGACACTTATCAGTGGGTTGTCAAGCCCAAGACCGTCAAATATGAATTNAAAACCCAAACCCTTGTCCCTAAATTGGGGGTGATGCTTGTTGGGTGGGGTGGAAACAATGGTTCAACCCTCACTGGTGGTGTTATTGCTAACCGAGAGGGTATATCATGGGCAACAAAGGACAAGATTCAACAGGCCAATTATTTTGGGTCGCTGACCCAGGCTTCAGCAATTAGAGTGGGGTCTTTCCAAGGGGAGGAATTCTATGCCCCATTCAAGAGTCTGCTTCCAATGGTAAACCCAGAAGACATTGTGTTTGGGGGATGGGATATCAGTAACATGAACCTGGCTGATGCGATGGGCAGAGCCAGGGTGTTTGACATCGACCTACAGAAACAACTAAGGCCTTACATGGAATCCATGGTTCCACTCCCCGGAATCTATGACCCCGATTTCATTGCTGCCAACCAAGGTGACCGCGCCAACAACGTCATCAAAGGCACCAAGAAAGAACAAGTTCAACAAATCATCAAAGACATCAAGGACTTTAAGGAAGCCACCAAGGTTGACAGGGTGGTGGTCCTGTGGACTGCCAACACAGAGAGGTACAGCAATGTCGTTGTGGGGCTAAACGACACCATGGAAAACCTCTTGGCTTCCTTGGACAGGAATGAAGCTGAGATTTCCCCTTCAACCCTCTATGCCCTGGCTTGTATTCTGGAAAATGTTCCTTTCATCAATGGAAGCCCTCAGAACACCTTTGTCCCAGGGTTGATTGATCTGGCCATCAAGAGGAACAGTTTGATCGGTGGAGATGACTTCAAGAGTGGTCAGACCAAAATGAAATCTGTGTTGGTGGACTTCCTTGTGGGTGCTGGTATCAAACCAACATCAATAGTGAGTTACAACCATTTGGGAAACAATGATGGGATGAATCTCTCTGCCCCACAAACCTTCCGCTCTAAGGAAATCTCCAAGAGCAACGTTGTTGATGATATGGTCAACAGCAATGCCATCCTCTATGAGCCCGGCGAACACCCAGACCATGTCGTCGTTATTAAGTATGTGCCTTATGTGGGGGACAGCAAGAGAGCCATGGATGAGTACACTTCAGAGATATTCATGGGTGGAAAGAACACAATCGTGCTGCACAACACTTGTGAAGATTCACTGTTAGCTGCTCCTATCATCCTGGACTTGGTCCTTCTTGCTGAGCTCAGCACTCGAATCCAGTTCAAAGCTGAATCTGAGGACAAGTTTCACTCATTCCACCCGGTTGCAACCATCCTCAGTTACCTNACCAAGGCCCCCCTTGTCCCACCAGGTACACCAGTAGTGAATGCATTGTCAAAGCAGCGTGCTATGCTGGAAAACATCCTGAGAGCTTGTGTTGGATTGGCTCCTGAGAANAACATGATCCTGGAGTACAAGTGAAGCAGGGGAAAAGAAAGTAAAGGTTGGGTTGGGATAACCCAGTTGAATGTGCTGAAAACTTAATTATCCTATGCCCTTCTTTTACTTCTTATATATATGGATATGTTTGGTACCAAATGTAAAATTTAAAGATCGTATCCCTTCTTCTCCTGCCGACTTATTTGAGAGCAGGGCATCTAAGTATATGAAATAATACCGGTTATCAAATTAGTGTTTTGTGCTCAATTGATGTTTCTCTTCCTTCCCCTTTTTAATTTTTTGCATTTAGAATTTGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01463	15549	19549	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K01858	INO1, ISYNA1	EC:5.5.1.4	Inositol phosphate metabolism	map00562
			Streptomycin biosynthesis	map00521

Gene Ontology

biological_process

GO:0006021 inositol biosynthetic process

GO:0008654 phospholipid biosynthetic process

molecular_function
GO:0004512 inositol-3-phosphate synthase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001463s00032086.1	PF07994.7	NAD_binding_5	62	494	2.40E-117
Glyur001463s00032086.1	PF01658.12	Inos-1-P_synth	310	423	5.70E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.980
SRR1783600	control	17.262
SRR1783602	moderate drought stress	7.626
SRR1811619	moderate drought stress	7.598

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.751
DRR006520	Root Summer glycyrrhizin high producing strain	15.588
DRR006521	Root Winter glycyrrhizin high producing strain	0.411
DRR006522	Root Winter glycyrrhizin high producing strain	0.400
DRR006523	Root Summer glycyrrhizin low producing strain	0.806
DRR006524	Root Summer glycyrrhizin low producing strain	1.091
DRR006525	Leaf Summer glycyrrhizin high producing strain	480.190
DRR006526	Leaf Summer glycyrrhizin high producing strain	477.194

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.104
SRR2868004	Drought Stress (root)	6.268
SRR2967015	Control (root)	3.838

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	434.788
SRR9715740	Leaf	471.553
SRR9715741	Leaf	732.833
SRR9715739	Root	2.384
SRR9715742	Root	25.875
SRR9715743	Root	22.661

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.032
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	194.171
SRR8400027	Control - Root	223.143