Gene detail information of Glyur001462s00039318 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G71740.1 | 2.00E-22 | |
| NR | XP_004489910.1 | 1.67E-59 | PREDICTED: uncharacterized protein LOC101499835 [Cicer arietinum] |
| trEMBL | tr|G7ZYN0|G7ZYN0_MEDTR | 1.00E-55 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH26018.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01462 | 62015 | 62395 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.145 |
| SRR1783600 | control | 0.894 |
| SRR1783602 | moderate drought stress | 1.728 |
| SRR1811619 | moderate drought stress | 1.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.569 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.565 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.811 |
| SRR2868004 | Drought Stress (root) | 17.022 |
| SRR2967015 | Control (root) | 13.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.350 |
| SRR9715740 | Leaf | 0.162 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 3.722 |
| SRR9715742 | Root | 0.862 |
| SRR9715743 | Root | 0.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.175 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.191 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.966 |
| SRR8400027 | Control - Root | 8.384 |