Gene detail information of Glyur001460s00034799 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14090.1 | 9.00E-41 | |
| NR | XP_006604154.1 | 0 | PREDICTED: uncharacterized protein LOC102665678 [Glycine max] |
| trEMBL | tr|I1N7U3|I1N7U3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G26490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01460 | 16313 | 18786 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.966 |
| SRR1783600 | control | 2.039 |
| SRR1783602 | moderate drought stress | 6.661 |
| SRR1811619 | moderate drought stress | 6.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.223 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.212 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.146 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.200 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.466 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.424 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.400 |
| SRR2868004 | Drought Stress (root) | 2.259 |
| SRR2967015 | Control (root) | 1.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.347 |
| SRR9715740 | Leaf | 0.167 |
| SRR9715741 | Leaf | 0.204 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.457 |
| SRR9715743 | Root | 2.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.259 |
| SRR8749028 | MeJA induced 9h | 0.205 |
| SRR8749029 | MeJA induced 9h | 0.227 |
| SRR8749030 | Uninduced | 0.111 |
| SRR8749031 | Uninduced | 0.206 |
| SRR8749032 | Uninduced | 0.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.339 |
| SRR8400027 | Control - Root | 9.321 |