Gene detail information of Glyur001460s00034798 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14100.1 | 4.00E-12 | non-intrinsic ABC protein 14 |
| NR | XP_010028980.1 | 6.13E-28 | PREDICTED: ABC transporter I family member 11, chloroplastic [Eucalyptus grandis] |
| COG | YP_007168152.1 | 4.00E-10 | ABC transporter [Halothece sp. PCC 7418] |
| Swissprot | tr|Q8LEF6|AB11I_ARATH | 3.00E-17 | ABC transporter I family member 11, chloroplastic (Precursor) |
| trEMBL | tr|A0A059APW1|A0A059APW1_EUCGR | 2.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:KCW55814.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01460 | 3340 | 20894 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.852 |
| SRR1783600 | control | 2.795 |
| SRR1783602 | moderate drought stress | 1.701 |
| SRR1811619 | moderate drought stress | 1.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.505 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.399 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.236 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.707 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.166 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.323 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.819 |
| SRR2868004 | Drought Stress (root) | 5.352 |
| SRR2967015 | Control (root) | 5.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.613 |
| SRR9715740 | Leaf | 8.187 |
| SRR9715741 | Leaf | 6.204 |
| SRR9715739 | Root | 1.299 |
| SRR9715742 | Root | 2.047 |
| SRR9715743 | Root | 2.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.150 |
| SRR8749028 | MeJA induced 9h | 1.981 |
| SRR8749029 | MeJA induced 9h | 6.183 |
| SRR8749030 | Uninduced | 1.568 |
| SRR8749031 | Uninduced | 2.192 |
| SRR8749032 | Uninduced | 3.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.650 |
| SRR8400027 | Control - Root | 6.507 |