Gene detail information of Glyur001460s00034797 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G14100.1 | 2.00E-07 | non-intrinsic ABC protein 14 |
| NR | KHN13498.1 | 1.12E-13 | ABC transporter I family member 11, chloroplastic [Glycine soja] |
| Swissprot | tr|Q8LEF6|AB11I_ARATH | 9.00E-11 | ABC transporter I family member 11, chloroplastic (Precursor) |
| trEMBL | tr|I1N7U2|I1N7U2_SOYBN | 4.00E-14 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G26470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01460 | 433 | 1128 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.396 |
| SRR1783600 | control | 39.504 |
| SRR1783602 | moderate drought stress | 35.796 |
| SRR1811619 | moderate drought stress | 34.964 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.929 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.289 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 21.469 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.922 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.532 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.462 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 49.218 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 54.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.672 |
| SRR2868004 | Drought Stress (root) | 14.257 |
| SRR2967015 | Control (root) | 13.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.763 |
| SRR9715740 | Leaf | 12.004 |
| SRR9715741 | Leaf | 12.683 |
| SRR9715739 | Root | 5.447 |
| SRR9715742 | Root | 7.122 |
| SRR9715743 | Root | 5.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.063 |
| SRR8749028 | MeJA induced 9h | 8.362 |
| SRR8749029 | MeJA induced 9h | 9.587 |
| SRR8749030 | Uninduced | 2.506 |
| SRR8749031 | Uninduced | 2.706 |
| SRR8749032 | Uninduced | 3.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.333 |
| SRR8400027 | Control - Root | 16.013 |