Gene detail

Gene detail information of Glyur001451s00036285

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G01710.1	7.00E-82	Chaperone DnaJ-domain superfamily protein
NR	XP_004490444.1	9.34E-173	PREDICTED: uncharacterized protein LOC101502408 [Cicer arietinum]
COG	YP_684744.1	2.00E-09	chaperonin Hsp40 [Methanocella arvoryzae MRE50]
Swissprot	tr\|Q9FH28\|DNJ49_ARATH	6.00E-08	Chaperone protein dnaJ 49
trEMBL	tr\|G7KBK7\|G7KBK7_MEDTR	1.00E-170	Chaperone DnaJ-domain protein {ECO:0000313\|EMBL:AES98242.1}

Sequence

Transcript Sequence

>Glyur001451s00036285.1
ATGCAGAACGCAACGAGAGCAGAAGCAGAACGGTTACTGGGGATCGCGGAGAAGCTGTTACAGAACCGGGATCTGATGGGTTCTCGCGAATTCGCGATCCTGGCGCAGGAAACGGAGCCCCTTCTAGAAGGTTCTGACCAGATCCTAGCCATCATCGACGTCCTACTCGCCTCCGAGAAGCGCGTGAACAACAACAACGACTGGTACGCCGTCCTCCAAATCGATCGCCACCGCTCCGACGATCTCGACCTCATCAAGAGACAGTACCGCCGCCTCGCTCTTCTCCTCCACCCCGACAAGAGCCGCTTCCACTTCGCCGACCACGCCTTCAAGCTCGTCGCCGACGCCTGGGCCGTACTCTCCGACCCAATCAAGAAGTCCCACTACGACAAGGACCTCTCGTTCTTCTCCCGCGTGGACCTATCCGTCCCTGGATGGGTCCAGCAGGACAAGCTACCAGTCCGCAGGACTGGGCCTGGGCCCGCAACTGTCCCTGGGCCCAGTGCTCGCAGCCCTGCGGGCTTCGATCCGCGGAATAGCTCCTCGAGAGCGAGGGAAGAGGTTGCTGCGGATGAGAATTCCCGTAGGAGGACGTTCTGGACCGCGTGTCCTTACTGTTACCGTTTGTATGAGTACCCTAGGGTTTATGAGGGTTGCTGTTTGAGGTGTCCCAATTGTGAGAGATCCATTCACGGCGTTGCGGTTCCGTCTTTGCCGCCGCTTGTTCCGGGACAGGAGGCTTATTATTGCTGCTGGGGATTCTTCCCCATGGGATTCGTCCTTGGAAGCTTTGACTCNGGTGCCGAGAAAGAGGCTGTTCCGGTGGCTCCGGCCGCGGAGAAAGAGGCAGTGCCGGAGCCGGTACAGCCTCAGCCTGGTTCTTCGCTTCCGAATTGGATGCCGGCTCCAGTGGTGAACGGTGCGAATAATGTGGCGCCAATGCCAACACCAACGCCGGCGAGGGTTACTAGGTCTGGTGCTACTGCTGGTAGTGGTGGTGTTTCGAATGGGGTTGCTTTTGGTTCCAGATCTGCTCCGAAGAAGCGAGGGAGGCCGCGGAAGTATCCTTTGCAATCGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01451	68570	69649	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001451s00036285.1	PF00226.26	DnaJ	67	130	1.60E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	42.096
SRR1783600	control	41.901
SRR1783602	moderate drought stress	57.997
SRR1811619	moderate drought stress	57.407

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	53.093
DRR006520	Root Summer glycyrrhizin high producing strain	51.503
DRR006521	Root Winter glycyrrhizin high producing strain	39.209
DRR006522	Root Winter glycyrrhizin high producing strain	40.927
DRR006523	Root Summer glycyrrhizin low producing strain	46.219
DRR006524	Root Summer glycyrrhizin low producing strain	47.895
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.164
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.462

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	25.746
SRR2868004	Drought Stress (root)	26.516
SRR2967015	Control (root)	32.700

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	24.100
SRR9715740	Leaf	26.183
SRR9715741	Leaf	31.335
SRR9715739	Root	90.933
SRR9715742	Root	55.226
SRR9715743	Root	58.946

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	19.828
SRR8749028	MeJA induced 9h	14.470
SRR8749029	MeJA induced 9h	9.028
SRR8749030	Uninduced	2.549
SRR8749031	Uninduced	2.352
SRR8749032	Uninduced	5.512

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	32.220
SRR8400027	Control - Root	31.715