Gene detail

Gene detail information of Glyur001446s00035035.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G32010.1	2.00E-139	HSI2-like 1
NR	XP_004490716.1	0	PREDICTED: B3 domain-containing protein Os07g0679700-like [Cicer arietinum]
Swissprot	tr\|Q8W4L5\|VAL1_ARATH	0	B3 domain-containing transcription repressor VAL1
trEMBL	tr\|K7LR55\|K7LR55_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA11G31234.1}

Sequence

Transcript Sequence

>Glyur001446s00035035.1
GTATTGTCAAATTGTGCGTGTAACTCTGTATTCATTCAAGTGTGTCGTGCATGCATTGCATTTCTCAATCTTATGCTGCTTTGCATGCACTCTCTTCCTCTTTCTCTCTCTATAAAAACACACCCTCCTCACACCAATACCATCATTGCGGTTACGCATCCATCATTGATCATTGCATTATCCTGTTTTCTCTCTAATTACATAAATTCCCCCTTTCCTCTCTCCTTCTCATTCGAAATCCAACATTAATTTGACGTCACCAATCACGATTCTCTCTCTCTCTCTCTCTCTCTCTCAGTGTGTGCATGGTTGTAGCAGCAGCACATAGAAACCACTACTAAGTTATTGTTGCTGTGTTTTTAAGGGTTTTGACTTTGCAGTGCGAGGGAGGGATTTGATTTGGATTCTGTTCCAATGGGGCGTGGTGAAGTTTGCATGAATAGTTCGTGCAAGGATGGTTCTGCTACTGAATGGAAGAAGGGGTGGCCTCTGATCGATGGTGGATTCGCCAGACTCTGCAACAAGTGCGGACCTGCGTATGAGAATTCAGTTTTCTGTGATAAATTCCACCATCATGAAACTGGTTGGAGGGAATGCAGCTATTGCAACAAGCCTATCCACTGTGGATGTATCGTATCGAGGTCTTTGTTTGAGTACCTTGATTTTGGTGGTGTAGGTTGTGTTACCTGTGTAAAGGCTTCCCAGCTTTGTCCGGATACTGAAAATCCTAATGGTTCTGTTCGATCAACCAAAAATAATGCAAAGGATCAATATGCTGAACATATTGATGGTAGACTACTGGTGGGAAGTTCTGGTGAAGCAAAACTTGTGCAATTGTGTAAGATTGCTGAAGCTAGAGATTCAAGCTGTTGGCCTCAAGCTCAAAGAGATGGCATAGTTTCACGTATTGGTCCAAACAGCCAAGAAGTTAACTGTCCATTCAGGGAAAAGGATACAAGATTTTCAAATGTGATGAAACATTCTAGTCATTCATTAACATTTACTACATTAGAAAATAATAGACCAAAACGGGAAACTAAAAGTATGCATGAATCACTTTCACTGAGTATTTCTCTAGGAACCTCATCAGGAAATAGTGCCCTGCCTTCTGCCACAGAGAATACAGAAGGTAGACTTGAAGGTAAAGCATCCTCTCCCTTTCATCAAGGGCAAGGATCTCACCCTATATCGTCTAGATCATCAAAGACTGGTGTTGCCATGAATCTTGAAACAAATAAAGGCATGATTTCTCAGGCACGCAATGCCCGGCCACCTCCTGATGGGAAGGGCATAAATCATTTAATTTCTCGATACTGGCCTAGGATTACTAATCAAGAGCTAAAGCAATTGTCTGGAGATTTGAAGTCTACTGTAGTGCCCTTATTTGAGAAGGTGTTGAGTGCCAGTGATGCAGGTCGAATTGGTCGTCTTGTTCTCCCAAAAGCCTGCGCTGAGGCTTATTTTCCTCCTATTTCGCAATCAGAAGGTGTTCCTCTGCAGTTCCAAGATGTGAAAGGGAATGAGTGGACATTTCAGTTCAGATTTTGGCCTAATAACAACAGTAGGATGTATGTATTGGAGGGTGTAACCCCTTGCATACAGTCCATGCAATTAATTGCTGGTGATACTGTGATATTTAGTCGGATAGATTCTGGGGAAAAATTTGTAATAGGATTCAGAAGGGCATCAAATTCTATAGATATGCAGGATGCCTCTACATCGGCTCATTCTAATGGCATTTCAACAAAGGAAACAACCTCTTCTGGTGCAACTGAGAATCTGCCCTCAGGAAGCAGTTGTCCTGATCTTCTCCAATCAAGGAAAGGGAATGGGGAACCTAGCTTAAAAGGACATTCAGAACATCTACATTTGCGCACTGGAACTGCTGATTTGCTTCAAACTGAAAATTGTGAGAAGGTGATGAACAATGACTCATCGTGGCAACCGATTTCAGTTTCGGAGAAGAAGAGGACTTGCAATATTGGGCTGAAAAATAAGAGGTTACTCATTCGTAGTGAAGATGCTATGGAGTTGAGACTTACATGGGAAGAAGCACAAGACTTGCTTTGTCCGCCGCCTAGTGTCAAGCCAAGTATTGTAACAATTGAGGACCAAGTGTTTGAAGAATATGATGAACCCCCGGTTTTTGGAAAGAGAACTATAATCAATGCCTGTCCATCTGGTGAATTCACAATCACCACTTTAACTGCAAAACCACAGTTCAATTGGAGAAGCTTTTATGAATGCAGTTGTAGTGATCTCATCATTGATCTAGTCGACGGTGGAGCGCGAGATGGTCTGCATTCTGCAGATCTGGAATGGGGCACGGAATGGCGACCGACGACGGAAGAGGAAGAAAGGTCTTCGCGTTCTGTGTCAGAGCAGCGGAGTCCAAAGGAATCGGAAAATCTTCTGAGAAGCAGCAAAGATTCTAAAAAGCGAAAAATTGAAGAAAGAAGTAAGTCAATTCAAGATCACGAGCCTTCTCGCTTAGAAGCTCTTGCCAGTGCTGCAGTTTTGGGAGGTAATCTTGTTGACCCTGTTGAGTCGTCATCAGCTGGAGTCACCACAAAACATCCAAGGCATCGTCCTGGATGCACTTGTATCGTGTGCATTCAACCCCCAAGTGGAAAAGGAACACATAAGCCGACATGCACTTGCCTAGCGTGCGACACTGTGAAGCGCCGGTTCAAAACGCTTATGATGCGTAGGAAGAAACGCCAACACCAACGCGAAGCAGATGCTGCCCAGAAAGATCAGGTTCATCATCACAGGGATGAGTCAGATACCAATGGTGCAGCATCAAGGGGAGATACGAGTCACTCATCGAAAGAGGAAAGCCTTAACAAAGCTCGGCTTGAGAATGGTGACCCCAGTGCTGGACAAATAGATCTGAATTCTCATCCCAATCATGAAGATATGGAAGATGATATACAACAGAGCTGAGCATGACAATAGAAGGGAATATATGAATGGAGATGGCCAAAAACTTTAATTCTCAATTTAGATCAATTTTTTTTTTTTTACTTAATCTTCATTTTGGAAGCAGGAAAGAAGAGATCAGGTATAGTGTTCCCCCAGTGAAGGTCAGAACAATATTTCTNAACAGTCCTTTTATTATAGTTCTCCTTACTTGCACAGTATAGTATAGTTTACTTTTCTTTTCAAAAGGGTGGTATAGATAGTTTCTTTTCTTACAGTTAAAAGAACATGATTTTTCCCTTTTCATGGAAATGAGTCTGGAAATGTATTCTTTGTATGGATCAGATATAAACACAAGAATATAGTGTCTCATGTGGTGGTAACTATTCTTGTTTTCAACATGGTTCGGCTAAGGTAATTGTCTTATCCTAGGCCAGACTAGTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01446	14914	24737	-

Gene family

Gene family	subfamily
Transcription Factors Family	B3
EAR motif-containing Proteins	B3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001446s00035035.1	PF02362.16	B3	324	424	1.30E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.973
SRR1783600	control	10.138
SRR1783602	moderate drought stress	11.078
SRR1811619	moderate drought stress	11.104

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.800
DRR006520	Root Summer glycyrrhizin high producing strain	7.674
DRR006521	Root Winter glycyrrhizin high producing strain	6.738
DRR006522	Root Winter glycyrrhizin high producing strain	6.812
DRR006523	Root Summer glycyrrhizin low producing strain	18.128
DRR006524	Root Summer glycyrrhizin low producing strain	17.979
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.909
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.861

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.418
SRR2868004	Drought Stress (root)	11.626
SRR2967015	Control (root)	11.844

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	8.992
SRR9715740	Leaf	9.972
SRR9715741	Leaf	11.587
SRR9715739	Root	2.424
SRR9715742	Root	10.548
SRR9715743	Root	7.608

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	17.024
SRR8749028	MeJA induced 9h	17.513
SRR8749029	MeJA induced 9h	15.358
SRR8749030	Uninduced	11.136
SRR8749031	Uninduced	7.245
SRR8749032	Uninduced	6.181

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.905
SRR8400027	Control - Root	11.500