Gene detail information of Glyur001445s00037294 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16810.1 | 5.00E-17 | pumilio 24 |
| NR | ACU18257.1 | 1.11E-36 | unknown [Glycine max] |
| Swissprot | tr|Q9LRZ3|PUM24_ARATH | 7.00E-25 | Pumilio homolog 24 |
| trEMBL | tr|C6T8V5|C6T8V5_SOYBN | 4.00E-37 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU18257.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01445 | 40144 | 52723 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.256 |
| SRR1783600 | control | 1.261 |
| SRR1783602 | moderate drought stress | 2.999 |
| SRR1811619 | moderate drought stress | 2.967 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.800 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.784 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.160 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.867 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.126 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.125 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.191 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.710 |
| SRR2868004 | Drought Stress (root) | 1.029 |
| SRR2967015 | Control (root) | 1.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.199 |
| SRR9715740 | Leaf | 0.238 |
| SRR9715741 | Leaf | 0.697 |
| SRR9715739 | Root | 0.270 |
| SRR9715742 | Root | 0.660 |
| SRR9715743 | Root | 0.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.694 |
| SRR8749028 | MeJA induced 9h | 5.120 |
| SRR8749029 | MeJA induced 9h | 3.489 |
| SRR8749030 | Uninduced | 1.241 |
| SRR8749031 | Uninduced | 0.994 |
| SRR8749032 | Uninduced | 0.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.754 |
| SRR8400027 | Control - Root | 1.493 |