Gene detail information of Glyur001443s00035067 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G53400.1 | 2.00E-76 | |
| NR | XP_003537287.1 | 0 | PREDICTED: uncharacterized protein LOC100782226 [Glycine max] |
| trEMBL | tr|I1L8V0|I1L8V0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G05920.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01443 | 21631 | 23581 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.553 |
| SRR1783600 | control | 1.654 |
| SRR1783602 | moderate drought stress | 1.495 |
| SRR1811619 | moderate drought stress | 1.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.590 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.583 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.523 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.298 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.702 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.653 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.235 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.069 |
| SRR2868004 | Drought Stress (root) | 10.471 |
| SRR2967015 | Control (root) | 12.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.058 |
| SRR9715740 | Leaf | 0.460 |
| SRR9715741 | Leaf | 1.005 |
| SRR9715739 | Root | 4.096 |
| SRR9715742 | Root | 5.656 |
| SRR9715743 | Root | 4.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.879 |
| SRR8749028 | MeJA induced 9h | 7.548 |
| SRR8749029 | MeJA induced 9h | 3.939 |
| SRR8749030 | Uninduced | 1.236 |
| SRR8749031 | Uninduced | 0.265 |
| SRR8749032 | Uninduced | 0.615 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.290 |
| SRR8400027 | Control - Root | 6.350 |