Gene detail information of Glyur001441s00033225


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G27170.11.00E-52transmembrane receptors;ATP binding
NRXP_004489498.10PREDICTED: uncharacterized protein LOC101494533 [Cicer arietinum]
COGYP_001914303.13.00E-06leucin rich protein [Xanthomonas oryzae pv. oryzae PXO99A]
Swissprottr|Q40392|TMVRN_NICGU2.00E-56TMV resistance protein N
trEMBLtr|A0A072UH08|A0A072UH08_MEDTR0Disease resistance protein (TIR-NBS-LRR class) {ECO:0000313|EMBL:KEH25085.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold014412961569320-


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0007165  signal transduction


molecular_function

GO:0005515  protein binding

GO:0043531  ADP binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001441s00033225.1PF01582.15TIR6137494.90E-37
Glyur001441s00033225.1PF00931.17NB-ARC7958559.50E-09
Glyur001441s00033225.1PF00931.17NB-ARC141914863.80E-09


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.584
SRR1783600control3.623
SRR1783602moderate drought stress3.346
SRR1811619moderate drought stress3.034

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.838
DRR006520Root Summer glycyrrhizin high producing strain3.997
DRR006521Root Winter glycyrrhizin high producing strain2.631
DRR006522Root Winter glycyrrhizin high producing strain2.675
DRR006523Root Summer glycyrrhizin low producing strain2.459
DRR006524Root Summer glycyrrhizin low producing strain1.275
DRR006525Leaf Summer glycyrrhizin high producing strain1.396
DRR006526Leaf Summer glycyrrhizin high producing strain1.399

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)1.348
SRR2868004Drought Stress (root)1.897
SRR2967015Control (root)2.121

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf1.604
SRR9715740Leaf1.000
SRR9715741Leaf1.572
SRR9715739Root0.145
SRR9715742Root1.008
SRR9715743Root0.932

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.494
SRR8749028MeJA induced 9h0.328
SRR8749029MeJA induced 9h0.235
SRR8749030Uninduced0.091
SRR8749031Uninduced0.067
SRR8749032Uninduced0.597

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root4.293
SRR8400027Control - Root3.942