Gene detail information of Glyur001439s00036370 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21560.3 | 5.00E-18 | |
| NR | XP_006593801.1 | 8.10E-105 | PREDICTED: uncharacterized protein LOC102659598 isoform X1 [Glycine max] |
| trEMBL | tr|K7LY38|K7LY38_SOYBN | 3.00E-105 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G09601.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01439 | 16760 | 20221 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.242 |
| SRR1783600 | control | 0.220 |
| SRR1783602 | moderate drought stress | 0.382 |
| SRR1811619 | moderate drought stress | 0.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.076 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.076 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.077 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.065 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.942 |
| SRR2868004 | Drought Stress (root) | 1.297 |
| SRR2967015 | Control (root) | 1.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.312 |
| SRR9715740 | Leaf | 0.213 |
| SRR9715741 | Leaf | 0.326 |
| SRR9715739 | Root | 0.141 |
| SRR9715742 | Root | 1.106 |
| SRR9715743 | Root | 0.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.731 |
| SRR8749028 | MeJA induced 9h | 5.945 |
| SRR8749029 | MeJA induced 9h | 8.010 |
| SRR8749030 | Uninduced | 1.706 |
| SRR8749031 | Uninduced | 2.715 |
| SRR8749032 | Uninduced | 1.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.904 |
| SRR8400027 | Control - Root | 1.386 |