Gene detail information of Glyur001439s00036368 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G58320.1 | 4.00E-07 | PLAC8 family protein |
| NR | KHN24208.1 | 2.64E-25 | Protein PLANT CADMIUM RESISTANCE 9 [Glycine soja] |
| Swissprot | tr|P0CW98|PCR9_ARATH | 5.00E-09 | Protein PLANT CADMIUM RESISTANCE 9 |
| trEMBL | tr|I1J6M6|I1J6M6_SOYBN | 1.00E-25 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G20980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01439 | 12031 | 12319 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001439s00036368.1 | PF04749.12 | PLAC8 | 20 | 62 | 1.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.584 |
| SRR1783600 | control | 0.197 |
| SRR1783602 | moderate drought stress | 0.680 |
| SRR1811619 | moderate drought stress | 0.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.090 |
| SRR2868004 | Drought Stress (root) | 11.188 |
| SRR2967015 | Control (root) | 3.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.843 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.529 |
| SRR9715739 | Root | 0.424 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.596 |
| SRR8749028 | MeJA induced 9h | 1.015 |
| SRR8749029 | MeJA induced 9h | 1.425 |
| SRR8749030 | Uninduced | 4.846 |
| SRR8749031 | Uninduced | 9.986 |
| SRR8749032 | Uninduced | 3.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.044 |
| SRR8400027 | Control - Root | 4.311 |