Gene detail information of Glyur001438s00042074 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004496593.1 | 1.13E-12 | PREDICTED: homeobox-leucine zipper protein ANTHOCYANINLESS 2-like [Cicer arietinum] |
| trEMBL | tr|I1LDT8|I1LDT8_SOYBN | 6.00E-12 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G38280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01438 | 60660 | 61779 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.667 |
| SRR1783600 | control | 5.146 |
| SRR1783602 | moderate drought stress | 25.732 |
| SRR1811619 | moderate drought stress | 25.285 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.882 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.979 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.865 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.354 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.841 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.304 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.402 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.805 |
| SRR2868004 | Drought Stress (root) | 1.485 |
| SRR2967015 | Control (root) | 3.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.659 |
| SRR9715740 | Leaf | 6.594 |
| SRR9715741 | Leaf | 6.096 |
| SRR9715739 | Root | 1.068 |
| SRR9715742 | Root | 1.773 |
| SRR9715743 | Root | 1.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.291 |
| SRR8749028 | MeJA induced 9h | 0.197 |
| SRR8749029 | MeJA induced 9h | 0.112 |
| SRR8749030 | Uninduced | 0.177 |
| SRR8749031 | Uninduced | 0.134 |
| SRR8749032 | Uninduced | 0.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.748 |
| SRR8400027 | Control - Root | 10.456 |