Gene detail information of Glyur001438s00042072 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44800.1 | 7.00E-23 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| NR | XP_003516444.1 | 8.93E-141 | PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase-like [Glycine max] |
| COG | NP_947703.1 | 4.00E-07 | 2OG-Fe(II) oxygenase [Rhodopseudomonas palustris CGA009] |
| Swissprot | tr|P51091|LDOX_MALDO | 4.00E-22 | Leucoanthocyanidin dioxygenase |
| trEMBL | tr|K7K3Q0|K7K3Q0_SOYBN | 4.00E-131 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G33350.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01438 | 25888 | 28533 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001438s00042072.1 | PF14226.1 | DIOX_N | 47 | 143 | 2.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.181 |
| SRR1783600 | control | 3.557 |
| SRR1783602 | moderate drought stress | 4.445 |
| SRR1811619 | moderate drought stress | 4.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.192 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.333 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.264 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.642 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.106 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.374 |
| SRR9715739 | Root | 0.081 |
| SRR9715742 | Root | 0.361 |
| SRR9715743 | Root | 0.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.375 |
| SRR8400027 | Control - Root | 4.410 |