Gene detail information of Glyur001432s00041276 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G39050.1 | 1.00E-72 | HXXXD-type acyl-transferase family protein |
| NR | ABY91221.1 | 0 | isoflavonoid malonyl transferase 3 [Medicago truncatula] |
| Swissprot | tr|Q940Z5|PMAT1_ARATH | 1.00E-95 | Phenolic glucoside malonyltransferase 1 |
| trEMBL | tr|B4Y0U1|B4Y0U1_MEDTR | 0 | Isoflavonoid malonyl transferase 3 {ECO:0000313|EMBL:ABY91221.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01432 | 36690 | 38102 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001432s00041276.1 | PF02458.10 | Transferase | 19 | 463 | 7.30E-55 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.131 |
| SRR1783600 | control | 7.000 |
| SRR1783602 | moderate drought stress | 1.558 |
| SRR1811619 | moderate drought stress | 1.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.453 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.690 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.188 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.071 |
| SRR2868004 | Drought Stress (root) | 4.796 |
| SRR2967015 | Control (root) | 5.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.492 |
| SRR9715740 | Leaf | 0.099 |
| SRR9715741 | Leaf | 0.297 |
| SRR9715739 | Root | 4.815 |
| SRR9715742 | Root | 8.374 |
| SRR9715743 | Root | 6.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.752 |
| SRR8400027 | Control - Root | 4.912 |