Gene detail information of Glyur001429s00035084 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40070.1 | 1.00E-37 | |
| NR | XP_006602654.1 | 0 | PREDICTED: flocculation protein FLO11 isoform X1 [Glycine max] |
| trEMBL | tr|G7KS85|G7KS85_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AES79506.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01429 | 43098 | 47633 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.557 |
| SRR1783600 | control | 21.533 |
| SRR1783602 | moderate drought stress | 27.252 |
| SRR1811619 | moderate drought stress | 27.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.401 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.188 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.818 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.701 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 31.097 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.962 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.799 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.139 |
| SRR2868004 | Drought Stress (root) | 20.277 |
| SRR2967015 | Control (root) | 14.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.063 |
| SRR9715740 | Leaf | 6.379 |
| SRR9715741 | Leaf | 2.970 |
| SRR9715739 | Root | 8.151 |
| SRR9715742 | Root | 9.453 |
| SRR9715743 | Root | 10.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.058 |
| SRR8749028 | MeJA induced 9h | 3.857 |
| SRR8749029 | MeJA induced 9h | 2.736 |
| SRR8749030 | Uninduced | 4.975 |
| SRR8749031 | Uninduced | 3.376 |
| SRR8749032 | Uninduced | 2.683 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.389 |
| SRR8400027 | Control - Root | 9.449 |