Gene detail information of Glyur001429s00035083 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001041988.1 | 5.38E-30 | Os01g0142000 [Oryza sativa Japonica Group] |
| trEMBL | tr|Q0JQS6|Q0JQS6_ORYSJ | 2.00E-30 | Os01g0142000 protein {ECO:0000313|EMBL:BAF03902.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01429 | 42358 | 45372 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.331 |
| SRR1783600 | control | 7.836 |
| SRR1783602 | moderate drought stress | 8.349 |
| SRR1811619 | moderate drought stress | 9.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.260 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.526 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.214 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.175 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.794 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.211 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.248 |
| SRR2868004 | Drought Stress (root) | 0.271 |
| SRR2967015 | Control (root) | 0.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.098 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.012 |
| SRR9715742 | Root | 0.120 |
| SRR9715743 | Root | 0.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.116 |
| SRR8749028 | MeJA induced 9h | 0.105 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.029 |
| SRR8749031 | Uninduced | 0.022 |
| SRR8749032 | Uninduced | 0.503 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.079 |
| SRR8400027 | Control - Root | 0.052 |