Gene detail information of Glyur001427s00032580 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13600.1 | 0 | calmodulin-binding family protein |
| NR | KHN47980.1 | 0 | hypothetical protein glysoja_015450 [Glycine soja] |
| COG | YP_006808982.1 | 4.00E-11 | hypothetical protein O3I_020245 [Nocardia brasiliensis ATCC 700358] |
| trEMBL | tr|I1K3X1|I1K3X1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G28930.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01427 | 67855 | 70642 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.409 |
| SRR1783600 | control | 0.399 |
| SRR1783602 | moderate drought stress | 0.190 |
| SRR1811619 | moderate drought stress | 0.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.343 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.383 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.552 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.563 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.426 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.424 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.224 |
| SRR2868004 | Drought Stress (root) | 2.519 |
| SRR2967015 | Control (root) | 1.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.376 |
| SRR9715740 | Leaf | 0.525 |
| SRR9715741 | Leaf | 0.927 |
| SRR9715739 | Root | 0.110 |
| SRR9715742 | Root | 0.158 |
| SRR9715743 | Root | 0.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.086 |
| SRR8749028 | MeJA induced 9h | 34.651 |
| SRR8749029 | MeJA induced 9h | 25.609 |
| SRR8749030 | Uninduced | 3.236 |
| SRR8749031 | Uninduced | 2.507 |
| SRR8749032 | Uninduced | 1.786 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.525 |
| SRR8400027 | Control - Root | 0.776 |