Gene detail information of Glyur001427s00032573.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G75390.12.00E-28basic leucine-zipper 44
NRAFK47346.13.41E-69unknown [Medicago truncatula]
Swissprottr|P24068|OCS1_MAIZE2.00E-22Ocs element-binding factor 1
trEMBLtr|G7LIP1|G7LIP1_MEDTR1.00E-69Uncharacterized protein {ECO:0000313|EMBL:AFK47346.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0142727513281-


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001427s00032573.1PF00170.16bZIP_128878.00E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control82.175
SRR1783600control83.700
SRR1783602moderate drought stress148.223
SRR1811619moderate drought stress146.914

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain135.547
DRR006520Root Summer glycyrrhizin high producing strain133.719
DRR006521Root Winter glycyrrhizin high producing strain151.249
DRR006522Root Winter glycyrrhizin high producing strain148.282
DRR006523Root Summer glycyrrhizin low producing strain209.198
DRR006524Root Summer glycyrrhizin low producing strain209.132
DRR006525Leaf Summer glycyrrhizin high producing strain28.803
DRR006526Leaf Summer glycyrrhizin high producing strain28.564

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)164.637
SRR2868004Drought Stress (root)277.865
SRR2967015Control (root)342.888

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf88.187
SRR9715740Leaf62.946
SRR9715741Leaf114.850
SRR9715739Root89.524
SRR9715742Root116.562
SRR9715743Root97.711

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h408.520
SRR8749028MeJA induced 9h638.726
SRR8749029MeJA induced 9h673.601
SRR8749030Uninduced971.116
SRR8749031Uninduced2742.583
SRR8749032Uninduced3110.324

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root114.065
SRR8400027Control - Root135.263

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved