Gene detail information of Glyur001422s00031017 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G76070.1 | 3.00E-20 | |
| NR | XP_003603835.1 | 3.81E-86 | Syringolide-induced protein 14-1-1 [Medicago truncatula] |
| Swissprot | tr|Q9SGS5|Y1607_ARATH | 2.00E-32 | Uncharacterized protein At1g76070 |
| trEMBL | tr|G7J5W8|G7J5W8_MEDTR | 1.00E-86 | Syringolide-induced protein 14-1-1 {ECO:0000313|EMBL:AES74086.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01422 | 32543 | 33406 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.288 |
| SRR1783600 | control | 0.383 |
| SRR1783602 | moderate drought stress | 0.321 |
| SRR1811619 | moderate drought stress | 0.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.628 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.621 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.987 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.874 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.619 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.639 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.216 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.674 |
| SRR2868004 | Drought Stress (root) | 79.443 |
| SRR2967015 | Control (root) | 77.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.453 |
| SRR9715740 | Leaf | 2.395 |
| SRR9715741 | Leaf | 22.149 |
| SRR9715739 | Root | 0.099 |
| SRR9715742 | Root | 1.707 |
| SRR9715743 | Root | 1.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 62.295 |
| SRR8749028 | MeJA induced 9h | 131.447 |
| SRR8749029 | MeJA induced 9h | 47.969 |
| SRR8749030 | Uninduced | 324.888 |
| SRR8749031 | Uninduced | 387.451 |
| SRR8749032 | Uninduced | 186.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.891 |
| SRR8400027 | Control - Root | 9.743 |