Gene detail

Gene detail information of Glyur001420s00036541

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G36470.1	2.00E-134	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
NR	XP_004490224.1	0	PREDICTED: salicylate O-methyltransferase-like [Cicer arietinum]
COG	NP_924885.1	6.00E-22	cyclopropane-fatty-acyl-phospholipid synthase [Gloeobacter violaceus PCC 7421]
Swissprot	tr\|Q9SPV4\|SAMT_CLABR	5.00E-92	Salicylate carboxymethyltransferase
trEMBL	tr\|G7JWX2\|G7JWX2_MEDTR	0	Salicylic acid carboxyl methyltransferase {ECO:0000313\|EMBL:AES97152.1}

Sequence

Transcript Sequence

>Glyur001420s00036541.1
ATTCTAACTAAGAAAAAATGGATGTAGAGAAAGTCTTCCATATGACTGGAGGAGTTGGCAAAAGTAGCTATGCCAAGAATTCCTCACTACAGAAGGCGGCTTCTGATAAGGTGAAGCACATAATCATACAAACAGTTGAGGAGCTTTACCTTGAAACCACTCCAAAGAGTATAGGCATTGCTGATTTGGGGTGCTCCTCTGGACCCAACACCCTATCAATCATCAAAGACATCCTTCAAGCCATCCAATGGACAAGCCAAAAGATCATGCACCACTCTGCTGAGTTCAGGGTTTACTTCAATGATCTTCCAACCAATGACTTCAATTCAATCTTCAAGGCCCTTCCTGAGTTCCACAGGTTGCTTAGGCAAGATAGGAAAAATGGGTTCCCTTCCATTTTCATGGGAGGTTACCCTGGTTCCTTTTATGGAAGACTATTCCCTAACAGTTACTTGCACTTTGTCCACTCCTCCCACAGTTTGCACTGGCTTTCAAGGGTTCCTCCAGCACTCTATGATGAGCAGAAAAGGCCATTGAACAAGGGTTGTGTTTACATTTGTGAATCAAGCCCTGAAGTGGTGCCTCAAGCATACTCTAAGCAATTCCAGGAAGACTTTTCCTTGTTCCTTCGGTCAAGGTCTGAGGAACTAGTTGTGGGTGGAAGGATGGTGCTGATTTTCCTGGGAAGAAGGGGCCCAGAACATGTTGACAGAGGCAATTCTTTCTTCTGGGAGATTCTTTCCCGTGCATTTGCTATTCTAGTCTCACAGGGAGAAATAGAACAGGAGAAGCTTGATTCATATGACGTGCATTTCTATGCACCCTCAAGAGAAGAGATAGAAGAAGAGGTGAGGAAAGAAGGGTCGTTGAAGTTGGAGAGGGTGGAGATGTCTGAGAACAAGAGTGAGGTGCAAGACTGCAGGGAGAGCTATGGGACAGAGGTTGCAAAGACAGTGAGGGCCATCCAAGAATCAATGATCTCAAACCACTTTGGTGAAAGGATCTTGGACAGTTTGTTCCAGAACTATGCAAGACTGGTGGATGAAGAGATGGCTAAGGAGGATATTAAACCCATNACTTTTGTTACTGTTCTCAGAAAAATTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01420	51437	54930	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008168 methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001420s00036541.1	PF03492.10	Methyltransf_7	38	360	1.00E-111

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.509
SRR1783600	control	4.567
SRR1783602	moderate drought stress	13.758
SRR1811619	moderate drought stress	13.430

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.173
DRR006520	Root Summer glycyrrhizin high producing strain	1.152
DRR006521	Root Winter glycyrrhizin high producing strain	0.100
DRR006522	Root Winter glycyrrhizin high producing strain	0.097
DRR006523	Root Summer glycyrrhizin low producing strain	1.295
DRR006524	Root Summer glycyrrhizin low producing strain	1.287
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.091
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.080

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.895
SRR2868004	Drought Stress (root)	52.809
SRR2967015	Control (root)	53.075

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.816
SRR9715740	Leaf	3.716
SRR9715741	Leaf	5.830
SRR9715739	Root	9.023
SRR9715742	Root	10.773
SRR9715743	Root	11.414

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.602
SRR8749028	MeJA induced 9h	81.328
SRR8749029	MeJA induced 9h	27.724
SRR8749030	Uninduced	8.764
SRR8749031	Uninduced	0.820
SRR8749032	Uninduced	2.644

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	41.314
SRR8400027	Control - Root	23.803