Gene detail information of Glyur001419s00035733 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18690.1 | 2.00E-20 | MAP kinase substrate 1 |
| NR | XP_007137701.1 | 1.71E-62 | hypothetical protein PHAVU_009G148500g [Phaseolus vulgaris] |
| Swissprot | tr|Q8LGD5|MKS1_ARATH | 5.00E-24 | Protein MKS1 |
| trEMBL | tr|V7AWP4|V7AWP4_PHAVU | 6.00E-63 | Uncharacterized protein {ECO:0000313|EMBL:ESW09695.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01419 | 25554 | 26201 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001419s00035733.1 | PF05678.9 | VQ | 65 | 94 | 3.10E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.680 |
| SRR1783600 | control | 0.674 |
| SRR1783602 | moderate drought stress | 0.383 |
| SRR1811619 | moderate drought stress | 0.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.378 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.305 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.055 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.081 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.709 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.556 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.129 |
| SRR2868004 | Drought Stress (root) | 1.402 |
| SRR2967015 | Control (root) | 1.751 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.234 |
| SRR9715740 | Leaf | 1.685 |
| SRR9715741 | Leaf | 4.185 |
| SRR9715739 | Root | 5.090 |
| SRR9715742 | Root | 4.016 |
| SRR9715743 | Root | 3.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.695 |
| SRR8749028 | MeJA induced 9h | 0.554 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 1.304 |
| SRR8749031 | Uninduced | 0.201 |
| SRR8749032 | Uninduced | 0.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.832 |
| SRR8400027 | Control - Root | 1.862 |