Gene detail

Gene detail information of Glyur001414s00037880

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G00050.1	2.00E-82	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
NR	XP_004514235.1	0	PREDICTED: transcription factor UNE10-like [Cicer arietinum]
Swissprot	tr\|Q8GZ38\|UNE10_ARATH	1.00E-105	Transcription factor UNE10
trEMBL	tr\|I1J6F8\|I1J6F8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G15930.1}

Sequence

Transcript Sequence

>Glyur001414s00037880.1
CAAATTTGTTTCAAATTTTTCTACAGTATAAGATACAGTATTATTCTTTTCTTTTTTATGTGTACACGCCGAACAAATCTAAATCATTGAAACGACAAACAGAACTGACTCCACACAAATTTCTTCAACACACATGGACTAGATTTTCTCCTTTCGTGTAGNGAAATGAACTCCACAAGCTACTTTCCCTCACTCGTTCGGACCCAATTTACAACTAGATCAAATCCAACTATATATCAATACTTTCCACTCTCACTTTCTCCACACTCATCAGTATTCCTCCACAACATGTGAAAGAGAGAAGAACACGCTTAGAGTGTACGGTTTTTCAATCCTTCCAAAAGATGAGCCAGTGTGTTCCCAGCTGGGATGTGGACGACAACCCACCACCCCCAAGATCAGTCTCTCTTCGTTCCAACTCCAATTCAACTGCTCCTGATATTCCCATGTTAGACTATGAAGTTGCAGAGCTGACATGGGAAAATGGACAACTTTCTATGCATGGGTTAGGGTTGCCGCGAGTGCCGGCAAAGCCCTCCACAACNGCCGCCAATACCCCTTCCAAGGATGCATGGGAAAAGCCACGTGCAAGTGGCACCTTGGAGTCCATAGTGAACCAAGCCACTAGCTTACCACACTGCCACAGATCAACTTTTGCTGCAGGTGGTACTGGTGGTGGCGATGATGGCAGTGGTGGTGGTGTCTATGGAAACGTGTTAGTCCCATGGCTTGACCCCCACCGTCTTGCTGTCATCGCCGCTGCTACTGCCTCAAACACCATGACTATGGACGCACTGGTGCCCTGCTCAAATCGCACGGAAGAGCAAGGCACCGGAGGGCTTGGCACATGCATGGTGGGTGGATCCACACGTGTGGGGTCTTGCAGCACTGCCACCGCTACGCAGGAGGATGGTGCGCTCCTCGCGGCCGCAGCGGCCGCGAAGCATGTGAGGGTGGCACATCATCATGTGCCGGGGAGTAGCCGGGATCAGAGCGTGAGTGGCAGCGCCACCTTNGGGAGGCACAGCCAGCACATGACACTAGACACATCCGACATGGATTTCGGTGTAGGTTTCACTTCCACCTCTATGGGNTCGCTGGAAAACACAAGCTCCGCCAAGCAGTGCACCAAGACCACCACCGTAGACGACCACGATTCTGTTTGCCANAGTAGATCAATGAGGGATGACGCGGAGGGGGAAGAGAAAAAGAGAGAAAATCGAAAATCATCGGTGTCCACTAAAAGGAGCAGAGCTGCAGCTATACACAACCAATCCGAAAGGAAAAGGAGGGATAAGATAAATCAGAGAATGAAGACATTGCAAAAGTTGGTCCCAAATTCCAGCAAGACTGATAAAGCTTCAATGTTGGATGAGGTGATAGAATATCTAAAACAGTTGCAAGCACAAGTGCAGATGATGAACAGATTCAACATGTCATCCATGATGCTCCCAATGACCATGCAACAACAGCTTCAAATGTCGATGATGACTCCAATGGGNATGGGGATGGGGATGGGGATGGGAATGGGCATGAACACCATGAATCGTGCTAACATCCCTGGCATCCCTCCGGTCCTCCACCCTTCTGCCTTCATGCCTATGGCCTCATGGGATGCCGCCACTGCCGGCGGCGGCGGCGGCGACCGACTTCAAGGGCCTCCGGCCACCGTGATGCCTGACCCTATGTCCGCATTTTATGGATGCCAATCACAGCCCATGACCATGGATGCCTACAGTAGGATTGCTGCCATGTATCAGCAGATGCACCAACCTCCAGCTCCGGCTTCTAAGAGTTGAGCAGCTCGCTAGTATTCTTCAGTTGTTTTGTTAAGCTGCAACAAGCGAAAATATGTGCATATTTATTCTTTTTCAGAGATTATTGTATATTTGCTCCAATGAAAGTTAATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01414	53794	61228	+

Gene family

Gene family	subfamily
Transcription Factors Family	bHLH

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0046983 protein dimerization activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001414s00037880.1	PF00010.21	HLH	308	353	4.00E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.204
SRR1783600	control	0.227
SRR1783602	moderate drought stress	0.080
SRR1811619	moderate drought stress	0.076

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.174
DRR006522	Root Winter glycyrrhizin high producing strain	0.170
DRR006523	Root Summer glycyrrhizin low producing strain	0.398
DRR006524	Root Summer glycyrrhizin low producing strain	0.348
DRR006525	Leaf Summer glycyrrhizin high producing strain	84.355
DRR006526	Leaf Summer glycyrrhizin high producing strain	82.714

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.179
SRR2868004	Drought Stress (root)	0.663
SRR2967015	Control (root)	0.334

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	144.225
SRR9715740	Leaf	208.177
SRR9715741	Leaf	149.581
SRR9715739	Root	0.091
SRR9715742	Root	3.166
SRR9715743	Root	2.618

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.035
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.031

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.171
SRR8400027	Control - Root	0.933