Gene detail information of Glyur001413s00028464 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G21920.1 | 1.00E-07 | |
| NR | XP_004486157.1 | 4.08E-48 | PREDICTED: uncharacterized protein LOC101500677 [Cicer arietinum] |
| trEMBL | tr|A0A072V691|A0A072V691_MEDTR | 2.00E-48 | Uncharacterized protein {ECO:0000313|EMBL:KEH36843.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01413 | 2263 | 2619 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001413s00028464.1 | PF14009.1 | DUF4228 | 47 | 116 | 5.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.409 |
| SRR1783600 | control | 0.345 |
| SRR1783602 | moderate drought stress | 0.331 |
| SRR1811619 | moderate drought stress | 0.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.994 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.452 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.780 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.294 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.477 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.141 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.039 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 43.947 |
| SRR2868004 | Drought Stress (root) | 53.702 |
| SRR2967015 | Control (root) | 54.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.978 |
| SRR9715740 | Leaf | 0.713 |
| SRR9715741 | Leaf | 3.991 |
| SRR9715739 | Root | 0.406 |
| SRR9715742 | Root | 2.675 |
| SRR9715743 | Root | 1.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 119.506 |
| SRR8749028 | MeJA induced 9h | 207.864 |
| SRR8749029 | MeJA induced 9h | 262.523 |
| SRR8749030 | Uninduced | 224.130 |
| SRR8749031 | Uninduced | 527.195 |
| SRR8749032 | Uninduced | 257.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.666 |
| SRR8400027 | Control - Root | 10.050 |