Gene detail information of Glyur001412s00036651 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G20635.1 | 4.00E-13 | |
| NR | XP_003609995.1 | 2.02E-33 | hypothetical protein MTR_4g125190 [Medicago truncatula] |
| Swissprot | tr|Q6AWT8|GG3_ARATH | 1.00E-15 | Guanine nucleotide-binding protein subunit gamma 3 (Precursor) |
| trEMBL | tr|G7IGE5|G7IGE5_MEDTR | 5.00E-27 | GGL domain protein {ECO:0000313|EMBL:AES65547.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01412 | 41563 | 43068 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001412s00036651.1 | PF00631.17 | G-gamma | 1 | 47 | 2.80E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.602 |
| SRR1783600 | control | 1.689 |
| SRR1783602 | moderate drought stress | 0.715 |
| SRR1811619 | moderate drought stress | 0.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.391 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.654 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.957 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.829 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.017 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.486 |
| SRR2868004 | Drought Stress (root) | 1.962 |
| SRR2967015 | Control (root) | 1.253 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.516 |
| SRR9715740 | Leaf | 0.467 |
| SRR9715741 | Leaf | 1.635 |
| SRR9715739 | Root | 0.860 |
| SRR9715742 | Root | 1.262 |
| SRR9715743 | Root | 2.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.480 |
| SRR8749028 | MeJA induced 9h | 0.092 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.500 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.345 |
| SRR8400027 | Control - Root | 3.975 |