Gene detail information of Glyur001409s00044173 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23160.1 | 3.00E-11 | |
| NR | XP_004498125.1 | 2.50E-105 | PREDICTED: uncharacterized protein At5g23160-like [Cicer arietinum] |
| Swissprot | tr|Q5XV36|Y5316_ARATH | 3.00E-20 | Uncharacterized protein At5g23160 |
| trEMBL | tr|A0A072VHN8|A0A072VHN8_MEDTR | 4.00E-88 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH40918.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01409 | 65123 | 66421 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.079 |
| SRR1783600 | control | 3.145 |
| SRR1783602 | moderate drought stress | 4.253 |
| SRR1811619 | moderate drought stress | 3.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.148 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.148 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.742 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.607 |
| SRR2868004 | Drought Stress (root) | 68.752 |
| SRR2967015 | Control (root) | 38.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.229 |
| SRR9715740 | Leaf | 3.704 |
| SRR9715741 | Leaf | 10.464 |
| SRR9715739 | Root | 6.160 |
| SRR9715742 | Root | 5.757 |
| SRR9715743 | Root | 4.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 36.564 |
| SRR8749028 | MeJA induced 9h | 121.882 |
| SRR8749029 | MeJA induced 9h | 151.261 |
| SRR8749030 | Uninduced | 180.448 |
| SRR8749031 | Uninduced | 470.697 |
| SRR8749032 | Uninduced | 210.700 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 22.193 |
| SRR8400027 | Control - Root | 16.976 |