Gene detail information of Glyur001406s00030098 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01406 | 64285 | 64707 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.397 |
| SRR1783600 | control | 2.493 |
| SRR1783602 | moderate drought stress | 3.789 |
| SRR1811619 | moderate drought stress | 3.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.581 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.888 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.298 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.578 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.904 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.545 |
| SRR2868004 | Drought Stress (root) | 0.516 |
| SRR2967015 | Control (root) | 0.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 56.322 |
| SRR9715740 | Leaf | 44.449 |
| SRR9715741 | Leaf | 27.225 |
| SRR9715739 | Root | 6.232 |
| SRR9715742 | Root | 7.977 |
| SRR9715743 | Root | 4.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.859 |
| SRR8749028 | MeJA induced 9h | 2.907 |
| SRR8749029 | MeJA induced 9h | 3.087 |
| SRR8749030 | Uninduced | 0.539 |
| SRR8749031 | Uninduced | 0.042 |
| SRR8749032 | Uninduced | 0.399 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.982 |
| SRR8400027 | Control - Root | 7.067 |