Gene detail information of Glyur001406s00030092 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01406 | 34043 | 34279 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.292 |
| SRR1783600 | control | 8.815 |
| SRR1783602 | moderate drought stress | 28.528 |
| SRR1811619 | moderate drought stress | 29.951 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.522 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.923 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 19.095 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.714 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.631 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.726 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.410 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.664 |
| SRR2868004 | Drought Stress (root) | 23.723 |
| SRR2967015 | Control (root) | 19.956 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.007 |
| SRR9715740 | Leaf | 2.590 |
| SRR9715741 | Leaf | 9.094 |
| SRR9715739 | Root | 1.092 |
| SRR9715742 | Root | 5.542 |
| SRR9715743 | Root | 3.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.959 |
| SRR8749028 | MeJA induced 9h | 1.167 |
| SRR8749029 | MeJA induced 9h | 0.799 |
| SRR8749030 | Uninduced | 1.216 |
| SRR8749031 | Uninduced | 0.168 |
| SRR8749032 | Uninduced | 1.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.277 |
| SRR8400027 | Control - Root | 18.700 |