Gene detail

Gene detail information of Glyur001405s00033413.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G42150.1	1.00E-112	Glutathione S-transferase family protein
NR	AES76041.2	0	glutathione S-transferase [Medicago truncatula]
COG	YP_003263165.1	2.00E-41	glutathione S-transferase domain-containing protein [Halothiobacillus neapolitanus c2]
trEMBL	tr\|G7KPS4\|G7KPS4_MEDTR	0	Glutathione S-transferase {ECO:0000313\|EMBL:AES76041.2}

Sequence

Transcript Sequence

>Glyur001405s00033413.1
ACCAAACCGACATAAACCCTTCTAAAAAGTTTCAACGACCAAACCAATCGAAAAGAGAGATCTGGTGTGGTGTGGTCTGGTTTGGTTTGGTTCGGTTCGGTTCTGTTCTGAATCTCACAATCACAGACACTATGAGAAGGGCTTCCTCCTCTGTTCTCTACAGGACCCTCGCCGCCGCTCGCGGCGGTTCCTCCGCCTCCATCTTCCTCCCTAACCGCTTCCTCCAGGCCGCTCTTTACGGCAGCGCCACCGGCGGCTCCTCTCACACTCGCCGCCGCTGGTTCTCTTCCCTCCTCACCCCGTTCACCGGAGCGTCTCTCGGCGTCGCCGGAGCTCTGTTCGCCGCNGCCTCCGTCTCTCACGAAGCCCTCGCCAAAGAACCGCCGCCGTCCCACGCTCTCCCCGACGATGTCGTTCTCTACCAATACGAGGCTTGCCCTTTCTGCAACAAGGTCAAAGCATTTTTGGACTACTATGATATACCGTACAAAGTTGTGGAGGTCAACCCACTTAGCAAGAAAGAAATCAAATGGTCTGAGTATCAGAAGGTGCCAATATTAATGGTAGATGGCGAGCAGCTAAATGACTCGTCAGCTATAATTGATAAGCTGGGAGAAAAGATTCTNTCAAAGACAAAGGCGACCTCTGAGGACGACGAAGAGACAAAATGGCGGCGGTGGGTTGATAATCATTTGGTACATGTTCTGTCACCTAACATATANCGAAATACTTCTGAAGCACTTGAGTCCTTTGACTATATCACCAGCAATGGCAATTTTAGCTTTATGGAAAAAATTTCGGTGAAGTATGCTGGGGCTGCAGCTATGTATTTTGTGTCAAAGAATCTAAAGAAGAAATATAACATTACTGATGAACGTGCTGCTCTTTATGAGGCAGCAGAAACATGGGTAGATGCTCTGAATGGCCGGGAGTTCCTTGGAGGGTCTAAGCCTAACTTTGCTGATCTGGCTGTCTTTGGGGTTTTAAGGCCCATACGCTATTTGAGGTCTGGCAAGGATATGGTGGAACACACACGTATTGGTGAGTGGTACACAAGAATGGAGAGTGTTGTGGGAGAGCCTTCCAGGATTAAAGCCTAAACAGGGTTCTTTTGAGTCCAGAATGCAGCCACTTTTTTTTTTTTCCTCCTATTACTTTGCTCTTGGGGTTTGCCTTCACTTATTTGAAGGAAATACAATTGGGTTTCTCAGTGAACATATTTGGTTATTTAGAAAGATGGTTGTGGTAGTTATAAAAATATAGGCAAAAAGTTTTGCTGATCAATTGATTCTTTAGAAAAAATGTTTTATATCTGTTATTG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01405	26591	31591	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K05309	PTGES2	EC:5.3.99.3	Arachidonic acid metabolism	map00590

Gene Ontology

biological_process
GO:0045454 cell redox homeostasis

molecular_function

GO:0005515 protein binding

GO:0009055 electron carrier activity

GO:0015035 protein disulfide oxidoreductase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001405s00033413.1	PF13417.1	GST_N_3	96	162	3.00E-14
Glyur001405s00033413.1	PF14497.1	GST_C_3	198	311	4.00E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.363
SRR1783600	control	17.422
SRR1783602	moderate drought stress	16.649
SRR1811619	moderate drought stress	16.651

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.980
DRR006520	Root Summer glycyrrhizin high producing strain	11.817
DRR006521	Root Winter glycyrrhizin high producing strain	17.106
DRR006522	Root Winter glycyrrhizin high producing strain	17.323
DRR006523	Root Summer glycyrrhizin low producing strain	16.892
DRR006524	Root Summer glycyrrhizin low producing strain	15.999
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.106
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.308

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.811
SRR2868004	Drought Stress (root)	13.036
SRR2967015	Control (root)	12.502

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.871
SRR9715740	Leaf	30.792
SRR9715741	Leaf	14.877
SRR9715739	Root	9.693
SRR9715742	Root	18.140
SRR9715743	Root	15.217

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	28.552
SRR8749028	MeJA induced 9h	13.400
SRR8749029	MeJA induced 9h	23.471
SRR8749030	Uninduced	5.975
SRR8749031	Uninduced	7.069
SRR8749032	Uninduced	9.457

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	22.836
SRR8400027	Control - Root	21.492