Gene detail information of Glyur001404s00041097 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09870.1 | 1.00E-14 | SAUR-like auxin-responsive protein family |
| NR | KHN48267.1 | 1.59E-36 | Auxin-induced protein 6B [Glycine soja] |
| Swissprot | tr|P33083|AX6B_SOYBN | 1.00E-08 | Auxin-induced protein 6B |
| trEMBL | tr|I1LZ77|I1LZ77_SOYBN | 1.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G20630.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01404 | 1068 | 1418 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001404s00041097.1 | PF02519.9 | Auxin_inducible | 36 | 112 | 5.50E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.091 |
| SRR1783600 | control | 0.105 |
| SRR1783602 | moderate drought stress | 3.622 |
| SRR1811619 | moderate drought stress | 3.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.045 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.121 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.049 |
| SRR9715740 | Leaf | 15.643 |
| SRR9715741 | Leaf | 36.012 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.176 |
| SRR9715743 | Root | 0.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.225 |
| SRR8749029 | MeJA induced 9h | 0.307 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.098 |