Gene detail information of Glyur001402s00032151 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28690.1 | 1.00E-14 | Protein of unknown function (DUF1635) |
| NR | XP_006576986.1 | 6.26E-68 | PREDICTED: uncharacterized protein LOC102660776 [Glycine max] |
| trEMBL | tr|K7KFP5|K7KFP5_SOYBN | 2.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G33090.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01402 | 66134 | 66937 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001402s00032151.1 | PF07795.6 | DUF1635 | 1 | 194 | 3.60E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.678 |
| SRR1783600 | control | 0.438 |
| SRR1783602 | moderate drought stress | 0.656 |
| SRR1811619 | moderate drought stress | 0.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.135 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.059 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.120 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.135 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.683 |
| SRR2868004 | Drought Stress (root) | 0.597 |
| SRR2967015 | Control (root) | 0.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.459 |
| SRR9715742 | Root | 0.231 |
| SRR9715743 | Root | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.802 |
| SRR8749028 | MeJA induced 9h | 2.267 |
| SRR8749029 | MeJA induced 9h | 2.265 |
| SRR8749030 | Uninduced | 0.158 |
| SRR8749031 | Uninduced | 0.297 |
| SRR8749032 | Uninduced | 0.304 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.467 |
| SRR8400027 | Control - Root | 5.594 |