Gene detail

Gene detail information of Glyur001402s00032148

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT2G37420.1	ATP binding microtubule motor family protein
NR	XP_004494989.1	PREDICTED: 125 kDa kinesin-related protein-like isoform X1 [Cicer arietinum]
Swissprot	tr\|P82266\|K125_ARATH	Probable 125 kDa kinesin-related protein
trEMBL	tr\|A0A072VL62\|A0A072VL62_MEDTR	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur001402s00032148.1
CTTCACTCACCTTTTCTTTCCCCAATTTTCAAATTCGCTTCGGAGACAGAGTTAAGAAAGAGCCACAGCGATAGCGAAGTTAAAATTTCAATTACAATAAATAAAAAAAACAAGAAGAACCAGAAAAGATCTCTTTTTCGACCACTCTTTCTCAGATTCTCCGATCAAAGGTTGTAGTAAAAGGTAGAAAATGATGTCAGTGACGCCGGATCAGTCTAAGAAAGTTGGGATGGGGATGATGACAGCGTCTCCGTCTCCGTTTTTGACACCTCGCCCGGAACGACGCCGTCCCGATTCAAGAGGTTCCGATAAGAACTCAAACCGTCAGGACAAGGATAATAATAAAGAGACTAATGTGCAGGTCTTGCTTCGATGCAGGCCATTGAGCGATGATGAACAAAGGTCGAACGTTCCCAAGGTGGTGTCATGTAATGAAAATAAAAGGGAAGTGACTGTTATGCAGACTATAGCTAACAAGCAGGTTGATAGAGTTTTCAACTTCGACAAGGTTTTTGGACCTAAATCACAGCAAAGATCAATATACGACCAAGCCATTGCCCCAATTGTAACTGAAGTTCTTGATGGTTTCAACTGCACTGTCTTTGCTTATGGCCAAACGGGGACTGGTAAAACTTATACAATGGAGGGTGGGATGAGAAATAAGGGTGGTGATTTAACTGCTGAGGCTGGTGTTATTCCAAGAGCAGTTCGTCAAATATTTGATATTTTGGAAGCACAAAATGCTGACTATAGCATGAAAGTCACATTCCTTGAGCTTTATAACGAAGAAATAACTGATTTATTGTCCCCTGAAGACAATTCTAGGCCTATAGAGGAAAAACCAAAGAAACCTGTAACCCTTATGGAGGACGGGAAGGGTAGTGTGGTGGTGAGAGGCCTTGAAGAAGAATCAGTTTACAGTGTAAATGAAATTTATACTCTGTTGGAACGAGGAGCATCAAAAAGGCGCACTGCAGAGACATTGCTTAACAAGAGAAGCAGCCGTTCGCATTCAGTCTTCACCATTACTGTCTATGTGAAAGAAACAACAATTGGCGATGAGGAGTTAATTAAATGTGGCAAGCTTAATCTTGTTGATTTGGCTGGATCAGAAAATATATTGCGCTCAGGAGCACGGGAGGGCCGTGCTAGAGAAGCTGGGGAGATAAACAAGAGCTTACTCACCTTGGGGCGTGTCATAAATGCACTTGTAGAACATTCTGCTCATGTGCCTTACAGAGATAGTAAGCTTACAAGGATTTTACGAGACTCCTTAGGAGGGAAAACAAAAACATGCATAATTGCTACTATTACCCCATCAGCTTATTGTTTGGAAGAAACACTAAGTACATTAGACTATGCTAGTCGAGCAAAAAACATAAAGAATAAGCCTGAGGCAAACCAAAAAGTTTCAAAGGCTGTTTTGTTGAAGGACTTGTACATGGAAATTGAGAGAATGAAAGAAGATGTTAGAGCAGCAAGGGAAAAGAATGGTGTATATATTTCTCATGAAAGATTTGTCAAGGAAGAAGCTGAAAAGAAGGCAAGGAATGAGAAGATAGAGCAATTAGAGAATGACCTCAATCTTAGNGAGAAACAAGTGGACACGTTCCGTGAGCTCTATTTAACAGAGCAAGAACATAAATTGGATTTGGAAAGCGAGCTTAAGGATTGCAAGGCGAATTTGGAAAAAACCAGCAATGACTTGCATGATCTACAAGAGAATTACAGACTAGTTGTTTCAAAGTTGAAGGAGAAGGAATGTACCATTTCCAAACTACTGAAATCAGAAAATGCCTTGATTGAGCGTGCAAAGGAAATGAGTACTGATCTGCAGAATGCATCAGATGGTATTAATTTACTGTCCTCGAAGTTAGATCACAAAGAAAGGATGGAGGCAGAAAATCAAAAAATAATATTGAGTTTTTCGTCTGTCTTGGANGAGAGCTTAAAAGATTTGCATACGACCATTATAGGATCCATTTCTCAACAACAGAAACAACTTAGATGCATGGAAGATCATGTCTGCTCTCATCTTGCCAGTAAAAATGATGCAGCACAAGCTCTAGAATCAAGGATCAAGAAAATGACAGAAATTTATAGTTCAGGAGTAGGGACCCTGAAGGAGCTAGCTAATACATTGCATATGAAAGCTTCGTCTGATATGGAACAGATACAGTCTAAAGTTTCTTCACAGACGATGGCCGTTGAAAATTTTCTTGCCACTGCTGTTCTTGAAGCCAATGATGTGATCGGCAACATCCAGAATTCTCTTGATGAGCAAAAACAGCTGCTAGCATTCTCCATTCAACAACAAGAGGAAGGATTACAACAAAGTATGACTTCAGCACGAGTGGTTTCAGAGGCAACTATACAATTCTTTGGTGACATTAATCTGCATTCTTCAAGAGTCNTGAAACTTCTTGAAGAGACTCAAAATGAGAGGTTCCACCAATTAGCTAATTTTGAGAAGAAGTTCAAGGAAGAGGCTGCAAAAGATGAGGAGCAGGCCATAGAGAAAATTTCAGCAATTTTGGCAACCTTGACATCTAAGAGAACTGCTATGGTCTCAGAGGCGTCAAGAAATATGCAGGACACAACTATGCAACAGTNTAAGAGATTGCAACTAGAGATGTTCAACATACAGCAAGTTTCAAAAGATGCTACCAAGGAAGTAAGTGAGTATGTAGAGAGTGCAAAATGTCAATTTGCAAAACAAATATTCTCAGCAAATGATATTAAAGCTACAATGGAGGATTGCCTCCTGGACTCAAAGACAGTGGACTGTTCCAGGAAGCAGTGGGAAAGTGCCCATTTGTCCTTCAACAATCTCCACANGAACAATCTTGCAGAGATCGAATCTGCAGTGAAAGAAAATATCTCGACAAATCATGCTCTGAATCAAGAANTTGTGTCTGCGTCATTATCTATGAATTCAGATTATGATGCAGGAACACGTGCACTGATGCTGGACCATGAGAATAAGAAGGAAATGGATTCTATGACTACACAGTGGTTGGAGCAGCTTAATTCATTACAAGATAAGCATGGTGAAGATATATCAAATATCCATGTCCAAGCAGAAAAGTGCCTTGTTAAAGATTACTTGGTTGACCAGAATACAAGTTCAACATCTCACAAAAGAATTGTATCAGTCCCTAGTATTGCATCCATTGAGGAGATGAGGACACAGATCACAGAAGACAATTCCACAGAGAACCGANTAAAATGGATCCAAGCAGAAAGCAAAATCCTGCGTCTAGCAGAAAATCGAACCCCTTTTGCGGATGTGAATTGACGAGTTTNACAGAGTTAGTTGGAACTCACACTAAACCTGTGCTTCAAATATAGTTGGGTAGAGTTAGATGAAAACAGTCTCTCTGCTTGCAGGGATAAGACTGCGTAGTANGTCTACCCTCCCCCAAATCACACTCGTGCACTAGGCTGCCCTTTAGAGGTAGATGAAAGTCCTTGCTAGTTCTATATGGGGGAAGCTCATCAGCTGATGAGCACCACTTATTGGTGTGATGTAAAATAATGCAATGTACTCAT

Protein Sequence

>Glyur001402s00032148.1
MMSVTPDQSKKVGMGMMTASPSPFLTPRPERRRPDSRGSDKNSNRQDKDNNKETNVQVLLRCRPLSDDEQRSNVPKVVSCNENKREVTVMQTIANKQVDRVFNFDKVFGPKSQQRSIYDQAIAPIVTEVLDGFNCTVFAYGQTGTGKTYTMEGGMRNKGGDLTAEAGVIPRAVRQIFDILEAQNADYSMKVTFLELYNEEITDLLSPEDNSRPIEEKPKKPVTLMEDGKGSVVVRGLEEESVYSVNEIYTLLERGASKRRTAETLLNKRSSRSHSVFTITVYVKETTIGDEELIKCGKLNLVDLAGSENILRSGAREGRAREAGEINKSLLTLGRVINALVEHSAHVPYRDSKLTRILRDSLGGKTKTCIIATITPSAYCLEETLSTLDYASRAKNIKNKPEANQKVSKAVLLKDLYMEIERMKEDVRAAREKNGVYISHERFVKEEAEKKARNEKIEQLENDLNLXEKQVDTFRELYLTEQEHKLDLESELKDCKANLEKTSNDLHDLQENYRLVVSKLKEKECTISKLLKSENALIERAKEMSTDLQNASDGINLLSSKLDHKERMEAENQKIILSFSSVLXESLKDLHTTIIGSISQQQKQLRCMEDHVCSHLASKNDAAQALESRIKKMTEIYSSGVGTLKELANTLHMKASSDMEQIQSKVSSQTMAVENFLATAVLEANDVIGNIQNSLDEQKQLLAFSIQQQEEGLQQSMTSARVVSEATIQFFGDINLHSSRVXKLLEETQNERFHQLANFEKKFKEEAAKDEEQAIEKISAILATLTSKRTAMVSEASRNMQDTTMQQXKRLQLEMFNIQQVSKDATKEVSEYVESAKCQFAKQIFSANDIKATMEDCLLDSKTVDCSRKQWESAHLSFNNLHXNNLAEIESAVKENISTNHALNQEXVSASLSMNSDYDAGTRALMLDHENKKEMDSMTTQWLEQLNSLQDKHGEDISNIHVQAEKCLVKDYLVDQNTSSTSHKRIVSVPSIASIEEMRTQITEDNSTENRXKWIQAESKILRLAENRTPFADVN

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01402	52776	60608	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001402s00032148.1	PF00225.18	Kinesin	61	397	4.10E-118

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.926
SRR1783600	control	3.948
SRR1783602	moderate drought stress	2.695
SRR1811619	moderate drought stress	2.681

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.974
DRR006520	Root Summer glycyrrhizin high producing strain	6.846
DRR006521	Root Winter glycyrrhizin high producing strain	0.062
DRR006522	Root Winter glycyrrhizin high producing strain	0.061
DRR006523	Root Summer glycyrrhizin low producing strain	1.705
DRR006524	Root Summer glycyrrhizin low producing strain	1.753
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.787
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.750

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	18.045
SRR2868004	Drought Stress (root)	7.161
SRR2967015	Control (root)	8.242

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.026
SRR9715740	Leaf	0.418
SRR9715741	Leaf	0.763
SRR9715739	Root	0.467
SRR9715742	Root	1.097
SRR9715743	Root	0.891

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	15.629
SRR8749028	MeJA induced 9h	16.233
SRR8749029	MeJA induced 9h	8.241
SRR8749030	Uninduced	0.161
SRR8749031	Uninduced	0.231
SRR8749032	Uninduced	1.090

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	16.023
SRR8400027	Control - Root	11.440