Gene detail information of Glyur001402s00032145 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37440.1 | 3.00E-60 | DNAse I-like superfamily protein |
| NR | XP_003541391.1 | 1.79E-118 | PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2-like [Glycine max] |
| Swissprot | tr|Q9LR47|IP5P3_ARATH | 1.00E-27 | Type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 |
| trEMBL | tr|K7LZI5|K7LZI5_SOYBN | 7.00E-119 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G19540.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01402 | 34636 | 40747 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.009 |
| SRR1811619 | moderate drought stress | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.559 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.429 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.150 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.224 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.260 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.004 |
| SRR2868004 | Drought Stress (root) | 15.435 |
| SRR2967015 | Control (root) | 28.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.566 |
| SRR9715740 | Leaf | 0.026 |
| SRR9715741 | Leaf | 0.314 |
| SRR9715739 | Root | 0.046 |
| SRR9715742 | Root | 0.739 |
| SRR9715743 | Root | 0.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.012 |
| SRR8749029 | MeJA induced 9h | 0.046 |
| SRR8749030 | Uninduced | 0.057 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.591 |
| SRR8400027 | Control - Root | 0.651 |