Gene detail information of Glyur001399s00035640 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40435.1 | 3.00E-49 | |
| NR | XP_003616743.1 | 2.00E-85 | Transcription factor bHLH93 [Medicago truncatula] |
| trEMBL | tr|I3SIX9|I3SIX9_MEDTR | 7.00E-86 | Uncharacterized protein {ECO:0000313|EMBL:AFK40221.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01399 | 68634 | 71047 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 28.335 |
| SRR1783600 | control | 27.798 |
| SRR1783602 | moderate drought stress | 16.491 |
| SRR1811619 | moderate drought stress | 16.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.125 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.415 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.222 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.851 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.844 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.313 |
| SRR2868004 | Drought Stress (root) | 7.710 |
| SRR2967015 | Control (root) | 3.944 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.189 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.631 |
| SRR9715739 | Root | 0.536 |
| SRR9715742 | Root | 1.385 |
| SRR9715743 | Root | 0.762 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.038 |
| SRR8749032 | Uninduced | 0.031 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.695 |
| SRR8400027 | Control - Root | 59.361 |