Gene detail information of Glyur001397s00036960 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67920.1 | 4.00E-07 | |
| NR | KHN45262.1 | 1.44E-34 | hypothetical protein glysoja_041948 [Glycine soja] |
| trEMBL | tr|I1KJ78|I1KJ78_SOYBN | 5.00E-35 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G11800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01397 | 49279 | 49500 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.965 |
| SRR1783600 | control | 1.220 |
| SRR1783602 | moderate drought stress | 3.611 |
| SRR1811619 | moderate drought stress | 3.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.293 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.347 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.161 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.171 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.235 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.982 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.993 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.115 |
| SRR2868004 | Drought Stress (root) | 27.824 |
| SRR2967015 | Control (root) | 11.355 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.010 |
| SRR9715740 | Leaf | 9.960 |
| SRR9715741 | Leaf | 65.506 |
| SRR9715739 | Root | 5.574 |
| SRR9715742 | Root | 7.952 |
| SRR9715743 | Root | 6.886 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.737 |
| SRR8749028 | MeJA induced 9h | 35.626 |
| SRR8749029 | MeJA induced 9h | 33.177 |
| SRR8749030 | Uninduced | 25.887 |
| SRR8749031 | Uninduced | 77.396 |
| SRR8749032 | Uninduced | 102.537 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.830 |
| SRR8400027 | Control - Root | 24.139 |