Gene detail information of Glyur001395s00031217 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G14360.1 | 3.00E-104 | UDP-galactose transporter 3 |
| NR | KHN01190.1 | 1.04E-157 | UDP-galactose/UDP-glucose transporter 3 [Glycine soja] |
| Swissprot | tr|Q9M9S6|UTR3_ARATH | 2.00E-140 | UDP-galactose/UDP-glucose transporter 3 |
| trEMBL | tr|I1J5M6|I1J5M6_SOYBN | 5.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G05170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01395 | 56522 | 60068 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001395s00031217.1 | PF08449.6 | UAA | 1 | 212 | 1.00E-68 |
| Glyur001395s00031217.2 | PF08449.6 | UAA | 14 | 320 | 2.30E-93 |
| Glyur001395s00031217.3 | PF08449.6 | UAA | 1 | 212 | 1.00E-68 |
| Glyur001395s00031217.4 | PF08449.6 | UAA | 14 | 110 | 6.30E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.687 |
| SRR1783600 | control | 18.910 |
| SRR1783602 | moderate drought stress | 12.146 |
| SRR1811619 | moderate drought stress | 11.705 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 35.206 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.358 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.145 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.866 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.993 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.970 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.603 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.930 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 65.248 |
| SRR2868004 | Drought Stress (root) | 49.618 |
| SRR2967015 | Control (root) | 47.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 60.292 |
| SRR9715740 | Leaf | 40.485 |
| SRR9715741 | Leaf | 69.609 |
| SRR9715739 | Root | 32.508 |
| SRR9715742 | Root | 28.979 |
| SRR9715743 | Root | 31.641 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 100.217 |
| SRR8749028 | MeJA induced 9h | 83.023 |
| SRR8749029 | MeJA induced 9h | 128.573 |
| SRR8749030 | Uninduced | 59.228 |
| SRR8749031 | Uninduced | 99.152 |
| SRR8749032 | Uninduced | 66.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 55.060 |
| SRR8400027 | Control - Root | 45.964 |