Gene detail information of Glyur001389s00037970 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21270.1 | 2.00E-28 | wall-associated kinase 2 |
| NR | KEH40344.1 | 1.74E-82 | wall-associated receptor kinase-like protein [Medicago truncatula] |
| Swissprot | tr|Q9LMP1|WAK2_ARATH | 4.00E-31 | Wall-associated receptor kinase 2 (Precursor) |
| trEMBL | tr|A0A072VEB7|A0A072VEB7_MEDTR | 7.00E-83 | Wall-associated receptor kinase-like protein {ECO:0000313|EMBL:KEH40344.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01389 | 22001 | 23794 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001389s00037970.1 | PF13947.1 | GUB_WAK_bind | 55 | 156 | 6.00E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.039 |
| SRR1783600 | control | 0.078 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.250 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 16.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.066 |
| SRR2868004 | Drought Stress (root) | 0.080 |
| SRR2967015 | Control (root) | 0.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 74.372 |
| SRR9715740 | Leaf | 50.604 |
| SRR9715741 | Leaf | 118.215 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.582 |
| SRR9715743 | Root | 0.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.256 |
| SRR8749029 | MeJA induced 9h | 0.066 |
| SRR8749030 | Uninduced | 0.730 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.085 |
| SRR8400027 | Control - Root | 0.168 |