Gene detail

Gene detail information of Glyur001389s00037968

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G25680.1	8.00E-146	molybdate transporter 1
NR	XP_007161272.1	0	hypothetical protein PHAVU_001G056300g [Phaseolus vulgaris]
COG	YP_004180804.1	1.00E-73	sulfate transporter [Isosphaera pallida ATCC 43644]
Swissprot	tr\|Q9SL95\|MOT1_ARATH	0	Molybdate transporter 1
trEMBL	tr\|V7CWH7\|V7CWH7_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW33266.1}

Sequence

Transcript Sequence

>Glyur001389s00037968.1
CTCCTATAAATAAACTAACAATTTCCCATTTTCCAATTCATGTTCTCTCCTCCAATAGGTTGCTTAACTTAATTGCTAGACCATTGATACTCTTTTAGCCACTCTAAGTACAGTACCTTGAGACTTGCAGTGAGTTCCAAACCAAGCATATGGCATACCAAAACCCTCCTTCAATTCCAACCTCAGATCCGGAAGCACTTGAAATCACTCCTACACGAACTAGCCCTCCAGCCACTGCAGGTTTCACAGCCAAAGAAGCAGTGCAGAAAGTGAAAACCAACTTGGTTTTCCGTTCTAAATGGGCTGAACTTAACGGTGCCATGGGTGACCTTGGCACCTACATACCCATAATCTTGGCTCTGACCCTAGCCAGGGACCTCAACCTTGGCACCACATTGATCTTCACAGGTTTCTACAACATCATCACTGGTATGATTTANGGGGTCCCCATGCCNGTNCAGCCCATGAAGTCCATCGCNGCAGAGGCCTTATCCNANNCCGAATTCGGCGTGCCGGAGATCATGACGGCCGGAATCCTGACCGGCGGCGTATTGTTCGTTCTNGGTGTCACTGGGCTGATGCGGCTGGTGTACAAGTTGATTCCTTTATGTGTTGTGAGGGGGATTCAACTAGCACAGGGTTTGTCCTTTGCTTTGACCGCAGTCAAATACGTGAGGAAAGTGCAAAACCTTCCAAAGTCCAAATCTTTGGGTCAAAGGCCATGGTTTGGGTTGGATGGGTTAGTTCTAGCCATTGTTTGTGCTTGTTTTATTGTGATTGTGAATGGAGCTGGTGAAAAGAATCGTGGGTGTTGTGATGGTGCTCCAGAAAGTGGTGACAATTTGGATGGCCAAAGGAATGATCATGGTACCGAAGGTGCATCTAGAAACAGGACAAGTAGATTGAGGAAGATTGTTTTTTCACTTCCTTCTGCTTTTATAATCTTTGTGTTGGGTATTGTTTTGGCCTTCATAAGAAGGAGTGAGGTGGTGCATGAAATCAAGTTTGGACCCTCCCAAATAGAGGTGTTAAAATTCAGTAGGCATGCTTGGAAGAAAGGTTTTGTGAAGGGTGCAATTCCTCAACTACCCTTGTCAATCCTAAATTCTGTGATAGCTGTTTGCAAGCTGTCATCAGATCTGTTCCCAGGGAGGGAATTTTCAGTTACCTCAATTTCAGTTACTGTTGGGTTGATGAACTTGGTGGGTTGTTGGTTTGGTGCCATGCCATCATGCCATGGTGCTGGTGGGCTAGCAGGGCAGTACAAGTTTGGTGGGAGGAGTGGAGGGTGTGTGGCACTTCTTGGTGCTGCCAAATTGGTGTTGGGTTTGGTGTTGGGGACTTCTTCGTCACACATTTTGAACCAGTTCCCTGTGGGGATCCTGGGTGTGTTGCTCCTGTTTGCTGGGATTGAACTTGCAATGTGCTCTAGGGACATGAATTCCAAGGAAGATTCCTTTGTGATGCTCATTTGCACTGCTGTTTCACTGGTGGGGTCAAGTGCTGCACTTGGGTTTTTGTGTGGGATGGTTGTTTTTGTGCTGCTTAAGCTTAGGAGTTGGACAAAGGATAAACCACTTTCTATCATCTGGACACAGAAAAGCCCTGCATAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01389	15211	17394	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0008272 sulfate transport

GO:0015689 molybdate ion transport

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0015098 molybdate ion transmembrane transporter activity

GO:0015116 sulfate transmembrane transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.388
SRR1783600	control	0.371
SRR1783602	moderate drought stress	0.216
SRR1811619	moderate drought stress	0.243

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.196
DRR006520	Root Summer glycyrrhizin high producing strain	2.342
DRR006521	Root Winter glycyrrhizin high producing strain	2.524
DRR006522	Root Winter glycyrrhizin high producing strain	2.042
DRR006523	Root Summer glycyrrhizin low producing strain	19.499
DRR006524	Root Summer glycyrrhizin low producing strain	20.232
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.336
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.315

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.998
SRR2868004	Drought Stress (root)	19.513
SRR2967015	Control (root)	11.483

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.066
SRR9715740	Leaf	0.203
SRR9715741	Leaf	0.316
SRR9715739	Root	0.117
SRR9715742	Root	2.027
SRR9715743	Root	1.595

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.291
SRR8749028	MeJA induced 9h	11.723
SRR8749029	MeJA induced 9h	6.030
SRR8749030	Uninduced	1.013
SRR8749031	Uninduced	1.029
SRR8749032	Uninduced	1.417

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.747
SRR8400027	Control - Root	4.236